| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3550 |
|---|
| Symbol | |
|---|
| ID | 4582105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 698668 |
|---|
| End bp | 699378 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639770863 |
|---|
| Product | acylneuraminate cytidylyltransferase |
|---|
| Protein accession | YP_917316 |
|---|
| Protein GI | 119386261 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
|---|
| TIGRFAM ID | [TIGR03584] pseudaminic acid CMP-transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0833068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.271433 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG CGATTATTCC CGCCCGTGGT GGCAGCAAGC GTATTCCCCG TAAGAACATC
CGTCCCTTCG GCGGCCGCCC GATGATCGCC TGGCCGATCG CCGCCGCGCG CGACAGCGGG
CTTTTCGATC ATGTCATCGT CTCGACCGAC GATGCCGAGA TCGCCGAAAC CGCCCTGGCC
CACGGCGCCG AGGTGCCCTT TCCGCGTCCG GTCGAACTGG CCGACGACTT CACCCCCACC
CGCGCGGTGA TCAATCACGC GATCCGCGCC ATGGAGGAGG CCCAGGGGCG CGAGGTCACG
CTGGCCTGCT GCATTTACGC CACCTCGGGC TTTCTCGATG CCTCGGATCT CGTCGGTGCG
CATGGGTTGC TGGCGGCGGA GCCGGCTGCG GGCTTCGTCT TCGCCGCGCT GCATTTTCCG
CATCCGCCCC AGCGCGCGCT GTGCCGGGGG CCAGAGGGCG GCGTCGCGAT GCTGCATCCC
GAACATGCCG GAACCCGCAG CCAGGACCTC TGTGAGACCT TCCACGACGC CGCGCAGTTC
TACTGGGGTC GCCGCGACGC CTTTCTCAGC GGGGCGCCGA TGTTCTCGAC ACTCGCCCGG
CCCTGGATCC TGCCGCGCGA CCGTGCGCTC GATATCGATA CGCCCGAGGA CTGGGATTGG
GCCGAGCGGT TGCTGGCCTT GCGCCAAGCC GCCGGGGAAA TCCCGGCATG A
|
|---|
| Protein sequence | MKIAIIPARG GSKRIPRKNI RPFGGRPMIA WPIAAARDSG LFDHVIVSTD DAEIAETALA
HGAEVPFPRP VELADDFTPT RAVINHAIRA MEEAQGREVT LACCIYATSG FLDASDLVGA
HGLLAAEPAA GFVFAALHFP HPPQRALCRG PEGGVAMLHP EHAGTRSQDL CETFHDAAQF
YWGRRDAFLS GAPMFSTLAR PWILPRDRAL DIDTPEDWDW AERLLALRQA AGEIPA
|
|---|
| |