Gene Pden_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3545 
Symbol 
ID4582100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp693902 
End bp694393 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID639770858 
ProductMarR family transcriptional regulator 
Protein accessionYP_917311 
Protein GI119386256 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.2487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.476183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG AGACCTTCTT TCCCTATCAA CTGGCCGTGG TGGCCGAAGC CTTTTCGCGC 
CAGCTTGTCG CGGTCTATGG CCGCGAGCAT GGTTTCACGC GCGAGGAATG GCGGCTGCTG
TTCCTGCTGG AGGATGCCGG GTCGCTGGAT TCGCTGCGGC TGTCCCAGCG CACCTCGCTG
GACAAGGTGC AGGTCAGCCG CGCCGCCTCG CGGTTGGAGG ACAAGGGGCT GATCACCCGC
GCCATCTTGG GCTCGGACCG GCGCCTGCGG AACTATGCCA TCACCGAGGC GGGGCGCGAC
CTGTTCCGCC GCGCCTTCGG CGAGGTTGAG GCCCGCGCGA ACGAGATATT GCAGGCGATG
CCGGCATGCG ACCGTGCCGC GCTGGAGCGG GGGATCGCCG CGCTGGACCA GGCCATCGCC
ACCGCGACCA GGCCCGAAAC CGGGCATGGC GCGTCGTTCC CCCGCCCTGG GCCGGCTGTT
CGCCCTGTTT AG
 
Protein sequence
MRIETFFPYQ LAVVAEAFSR QLVAVYGREH GFTREEWRLL FLLEDAGSLD SLRLSQRTSL 
DKVQVSRAAS RLEDKGLITR AILGSDRRLR NYAITEAGRD LFRRAFGEVE ARANEILQAM
PACDRAALER GIAALDQAIA TATRPETGHG ASFPRPGPAV RPV