Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3543 |
Symbol | |
ID | 4582098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 691538 |
End bp | 693247 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639770856 |
Product | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein |
Protein accession | YP_917309 |
Protein GI | 119386254 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.168659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.560044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAAGC CTGATCTGCC GGACCTGCCC GATACCTGCG ACCTTCTGGT CGTGGGTTCG GGTGCCGCGG GCATGGCGGC GGCGATCTCT GCCCATCATC ACGGGTTGAA GCCGGTCATC GTCGAGAAGT CCGAATTCTT CGGCGGCTCC ACCGCCGTTT CCGGCGGCGC GATCTGGGTG CCGTGCAATC CGATCGCCGC GGCGGCCGGC ATGACCGACG ACCGCGAGGC GGCGCGCGCC TATATCCGGG GCGAGACGGG CAATCGCTTC AATGCCGAGC TGGTGGACGC CTTTCTCGAC AAGAGCCCCG AGGCCATCGG CTTTTTCCAC GAAAGAACCG CGCTCAAGAT GGCGCATCGC GCGCTGTCGC CCGACTATCA TTCGGATGCG CCGGGTGCGA CCGAAGGCGG CCGGGCGCTG GACGCGCTGG ATTATGACGG CCGCCGGCTG GGGGCGGACC TTTATCGGAT GCGCCCGCCC ATCGCCGATT TCACGATCCT CGGCGGAATG CCGCTGGGGC GCCCGGACAT CTTTCACTTC CTGCGCATGA CCCGGTCGGT GAAATCGGCG GCCTATGCGA CCGGGGCAGT GCTGCGCTAT TTCCGCGACC GGCTGACCTG GGGGCGGAAC ACGCGGCTGG TGATGGGCGC GGCGGTCTCG GGGCGCCTGG CCGAGACGGT GTTCGCAAGG AACATCCCGC TTTTTACCGG GCATGAGCTG GTGCGGCTGC TGCAGGACGA ATCCGGGCGG GTCGTCGGGG CCGAACTCAA GGGGCCACGG GGCGTTTGCC GGATCGCGGC GCATCGCGGC GTGGTTCTTG CGGCGGGCGG CTATCCGCAT GATGCGGCGC GTCGGGCGCA AAGCTTCGAG CATGTCAGGC GCGGCCTGCC GCATTATTCG ATGTCGCCGG TCTCGGGCAC CGGCGGCGGG ATCGCCGCGG CCGAGGCCGT CGGAGCGGCC TTTGTCGACA CCAACCCCAA TGCCGGTTTC TGGACGCCGG TTTCGCTCTT GCGCAATGCC GACGGATCGG TGCGGCCCTT CCCGCATCTT TTCCTGGACC GTGCCAAGCC CGGCGTGATC GCCGTCGGCC ATGACGGCCG GCGCTTCGTC AACGAGGCTT CCAGCTATCA TGACTTCGTG CAGGGATTGA TCGCGAAGCT GCTGGCCGAC GGAGAGAAAT CCGCCTGGCT GGTCGCCGAT CACCGGGCGA TGCGGCGCTA TGGGCTGGGT GCCGCGCATG CCTTTCCGGC GCGGATCGGC CGGCATGTCG CCAGCGGCTA TCTGAAGCGC GACGCGACGC TGGAGGGGCT GGCCCGGCAA TGCGGCATCG ACGTCGCGAC GTTCCGGCAG ACGGTCGCCC TGTTCAACGA GGCGGCGGCA CGCGGCGAAG ACCCGGCCTT CGGCAAGGGA TCGACCAGCT ATCAGCGCTA TCTGGGCGAT GGCGAGAACC GGCCGAACCC CTGCCTGCGC CCGCTGGAGG GGCCGTTCTA CGCCGTCGAG ATCTATCCGG GCGACATCGG CACCTCTATG GGCCTGGACA TCACGGCGAA AGGCGAGGTC AGGGACAGCC GGGGCAGGAC GATACCCGGC CTCTATGCCT GCGGCAACGA CATCAATTCG GTGATGTCCG GCGCCTATCC CGGGCCGGGC ATCACGCTGG GTCCGGCGCT GACCTTCGGA TATGTCATCG GGCAATCGGC GGCCGCATGA
|
Protein sequence | MPKPDLPDLP DTCDLLVVGS GAAGMAAAIS AHHHGLKPVI VEKSEFFGGS TAVSGGAIWV PCNPIAAAAG MTDDREAARA YIRGETGNRF NAELVDAFLD KSPEAIGFFH ERTALKMAHR ALSPDYHSDA PGATEGGRAL DALDYDGRRL GADLYRMRPP IADFTILGGM PLGRPDIFHF LRMTRSVKSA AYATGAVLRY FRDRLTWGRN TRLVMGAAVS GRLAETVFAR NIPLFTGHEL VRLLQDESGR VVGAELKGPR GVCRIAAHRG VVLAAGGYPH DAARRAQSFE HVRRGLPHYS MSPVSGTGGG IAAAEAVGAA FVDTNPNAGF WTPVSLLRNA DGSVRPFPHL FLDRAKPGVI AVGHDGRRFV NEASSYHDFV QGLIAKLLAD GEKSAWLVAD HRAMRRYGLG AAHAFPARIG RHVASGYLKR DATLEGLARQ CGIDVATFRQ TVALFNEAAA RGEDPAFGKG STSYQRYLGD GENRPNPCLR PLEGPFYAVE IYPGDIGTSM GLDITAKGEV RDSRGRTIPG LYACGNDINS VMSGAYPGPG ITLGPALTFG YVIGQSAAA
|
| |