| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3542 |
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| Symbol | |
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| ID | 4582097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 690766 |
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| End bp | 691551 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639770855 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_917308 |
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| Protein GI | 119386253 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0769381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.815127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAC CAAGCAATCT GGACGGACGG ACGGCCATCG TGACCGGCGC GGGGCAGGGG
ATCGGCCTTG CGATCGCCGA GGCGCTGCTT GCAGCGGGCG CGCATGTCCT GGCCGTCGAT
CGCGAAGCGG CGGGCATCGA GGCGCTGGCG GCCCGCCCCG GGGTAACGGC CGTCCTGGGC
GATGTCACCG ACCCGGGCCT GCCGGAGCAG ATCGGCGCGG TCCTGGACGG CGCCCGGGCG
CGGCTGGACA TCCTGGTGAA CAATGCGGGG ATCGCGCGCG GCGCCCATGC GCTGCATACC
GGCGACGAGG ATTTCACCCG CTATTTCGAC ATCAACGTGC TTGGCCTTTT CCGCCTGTCA
CGCTGGGCCG TGCAGCGGAT GATGGATGCG GGCGGCGGCG CCATCGTCAA CACCGCCTCG
ATCTTCGGGC TGATCGGCGC GCAGAACTCC TGCGGCTATT CCGCGTCGAA GGCGGCGGTG
ATCGGGCTGA CCCGGCAGAT GGCCACCGAT TTCGGCCCGA ACGGCATCCG GGTGAATGCC
GTCGCGCCCG GCCTGATCGA GACGCCGCTG ACGGCCGAAC GCATCCGCAG CGAGCCGTGG
CGGCGGCACC AGATGATCGA CGGCTGCCCG CTGCGCCGCG TCGGCAAGCC CGAGGATGTG
GCCCGCGCCG TCCGCTTCCT CGCCTCGGAC GAGGCGTCGT TCATCACCGG CCATGTCCTG
ACGGTGGACG GGGGCTGGGC CATCGGCCGC TTCCCGCGCC AGGAGGCCAT CCATGCCGAA
GCCTGA
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| Protein sequence | MLEPSNLDGR TAIVTGAGQG IGLAIAEALL AAGAHVLAVD REAAGIEALA ARPGVTAVLG
DVTDPGLPEQ IGAVLDGARA RLDILVNNAG IARGAHALHT GDEDFTRYFD INVLGLFRLS
RWAVQRMMDA GGGAIVNTAS IFGLIGAQNS CGYSASKAAV IGLTRQMATD FGPNGIRVNA
VAPGLIETPL TAERIRSEPW RRHQMIDGCP LRRVGKPEDV ARAVRFLASD EASFITGHVL
TVDGGWAIGR FPRQEAIHAE A
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