Gene Pden_3532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3532 
Symbol 
ID4582087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp682508 
End bp683215 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content72% 
IMG OID639770845 
Producttransport system permease protein 
Protein accessionYP_917298 
Protein GI119386243 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC AAGGCCCGAT CCCGCATCCT CCGCTGCTGC GGCAGGCCCC GGCGGGCCGG 
CATTATGCGC TGGGGATCGC GGTGCTGGCT GTGCTGGCGC TGGCCAGCCT TGCCATCGGC
TCGCGCGCGG TGCCGCCCGG ACAGGTGCTT GCGGCGATGT TCGACTTCGA TCCCGGCAAC
GACCTGCATC TGATCGTGCG CGAATTGCGC CTGCCCCGGA CCCTGCTGGC GGTTTTCGCA
GGGGCGGCGC TTGGCCTTGC CGGGGCGGTC ATGCAGGCCG TCACCCGCAA TCCGCTGGCC
GAACCGGGGT TGCTGGGCGT GAACTCGGGG GCCGCGATCG CGGTGGTGCT GGGCGCCTCG
GCGCTGGGGC TGACGCAGAT GGCGCAATAT GTCTGGTTCG GTTTTCTGGG CGCGGGGCTG
GCGGGCGTCG CGGTGTTCCT GCTGGGACGG GCGCATGAAA GCGGCACCGA TCCGGTCCGG
CTGGTGCTGG CGGGGGCAGG AATCTCGGTC CTGCTGGGGG CGGCGGCCAG CCTGGTCATC
CTGAATTCGG CGCTGGAGGT GCTGGACCTG TTTCGCAACT GGGGCGCCGG CGCCCTGGAG
GGGCGCGGCC GCGCCGTCGC GCTGACCATG GGCGTGACGC TGGTCCTGGG GGGGGGCGCT
GGCCCTGGCG CTGGCGCCGG GGCTGAACGC CATGGCGCTG GGACATGA
 
Protein sequence
MTPQGPIPHP PLLRQAPAGR HYALGIAVLA VLALASLAIG SRAVPPGQVL AAMFDFDPGN 
DLHLIVRELR LPRTLLAVFA GAALGLAGAV MQAVTRNPLA EPGLLGVNSG AAIAVVLGAS
ALGLTQMAQY VWFGFLGAGL AGVAVFLLGR AHESGTDPVR LVLAGAGISV LLGAAASLVI
LNSALEVLDL FRNWGAGALE GRGRAVALTM GVTLVLGGGA GPGAGAGAER HGAGT