Gene Pden_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3523 
Symbol 
ID4582078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp672138 
End bp673163 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content73% 
IMG OID639770836 
Producttransport system permease protein 
Protein accessionYP_917289 
Protein GI119386234 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC GGGCCGGCGC CATGCCGGGC CGTCGGGCGG CGCGGAACAC GTTGGCGCTG 
GCGGCGGTCG TGCTGCTGGT GGCACTGCTT TGCGCGCTGT CGGTGGCGAT CGGCACCCGC
GATGTCGGCT GGGACGACAT CGCCGCCGCG CTGGCCGGCC GGGCCGAGAC CATCGGCCAG
GCCGCCAGCG CCGCACGGCT GCCGCGCACG GCGCTGGCCT TTCTGGCCGG AGCGGCGCTG
GGGCTTTCCG GGGCGCTGTT GCAGGGTGTC ACCCGCAATC CGCTGGCCGA TCCCGGCATC
CTGGGCATCA ACATGGGCGC AGCGCTGGCG GTAGTAGTGG GCGTCGCCTG GTTCTCGATC
ACCTCGGCAC AGGCCTATAT CTGGGCGGCG ATCCTGGGCG CGGGGCTGAC GGCGGTGTTC
GTCTATGTCA TCGGCTCGCT GGGCCGGGGC GGAGCGACGC CGCTGAAGCT GGCGCTGGCG
GGGGCCGCGA CCTCGGTCGC CTTCGCCTCG CTGGTGATCG CGGTGGTGCT GCCGCGCGGA
GACATCGCCG GGGGCATCCA GTCCTGGCAG GTTGGCGGCG TGGGCGGGGC GACCTTCGTA
CGCCTGGCGC CGGTGCTGCC TTTCCTGGCC ACGGGCTTCG CGATCAGCCT GCTTTGGGCG
CGCAAGCTGA ACGCGCTGGC GCTTGGCGAC GACCTGGCCG CCGGGCTGGG CGAGAATGTC
GCACGCACCC GCGCCATCGC CGGGCTTGGC GCCATCCTGC TGTGCGGGGC GACCACGGCG
GTCTGCGGGC CCATCGGCTT CGTCGGACTG GTGGTGCCGC ATTTCTGCCG CCTGCTGGTC
GGAACCGACC ATCGCTGGCT GCTGCCGTTT TCGGCGCTGG CGGGGGCGGG CTTGCTGCTG
GCCTCGGACA TCCTCGGCCG CATCCTGGCC CGGCCGGGCG AGCTTGACGT GGGCATCGTC
ACCGCCTTTG TCGGCGCGCC CTTCTTCATC TGGATCGTGC GCCGCCAGCG CCTGCGCGAG
CTGTGA
 
Protein sequence
MTARAGAMPG RRAARNTLAL AAVVLLVALL CALSVAIGTR DVGWDDIAAA LAGRAETIGQ 
AASAARLPRT ALAFLAGAAL GLSGALLQGV TRNPLADPGI LGINMGAALA VVVGVAWFSI
TSAQAYIWAA ILGAGLTAVF VYVIGSLGRG GATPLKLALA GAATSVAFAS LVIAVVLPRG
DIAGGIQSWQ VGGVGGATFV RLAPVLPFLA TGFAISLLWA RKLNALALGD DLAAGLGENV
ARTRAIAGLG AILLCGATTA VCGPIGFVGL VVPHFCRLLV GTDHRWLLPF SALAGAGLLL
ASDILGRILA RPGELDVGIV TAFVGAPFFI WIVRRQRLRE L