| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3522 |
|---|
| Symbol | |
|---|
| ID | 4582077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 671140 |
|---|
| End bp | 672141 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639770835 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_917288 |
|---|
| Protein GI | 119386233 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCGA AAACCCGCAT CTGCCTGACG CTGGCCGTCG CCCTCCTGTC GCTGGCTGGC
CTGCGCACGG CCTGGGCCCA GGGGGCCGAG GAGCGCTTTC CGGTCGCTGT CGAACATGCC
TTCGGCACCA CCACCATTCC TGCCCGGCCC CAGCGGGTCG CCACCGTCGC CTGGGCCAAC
CACGAGGTTC CGCTGGCGCT CGGCATCGTG CCGGTCGGGT TTGCCGCCGC CAATTTCGGC
GATGACGACG GCGACGGCGT CCTGCCCTGG GTCGAGGAGC GGCTGGAGGA GCTGGGCGCC
GAAACCCCGG TCCTGTTCGA CGAGGGCGAC GGCATCGATT TCGAGGCGGT CGCCGCCACC
CGCCCGGACG TGATCCTGGC CGCCTATTCC GGGCTCAGCC GGGCCGATTA CGACATGCTC
AGCCAGATCG CCCCGGTGAT CGCCTATCCC AAGACGCCTT GGGCGACGAA CTGGCGCGAC
ATGATCCGGT TGAACAGCGC CGGCCTGGGC ATGGAGGCCG AGGGCGACGC GCTGATCGCG
CGCATCGAGG GCCGGATCGC CGAGGCCGTT GCCGCCCATC CCCAGCTTGC CGGCAAGTCG
GCCATGTTCG TGACCCATCT GGACACCACG AACCTGAGCC TCGTCAGCTT CTACACCACC
CATGACACGC GCGTGCAGTT CTTTGCCGAT TTGGGGCTGC GCTCGCCGCA AAGCGTGGTC
GCGGCCTCGG CGGACGGCAG CTTTTCCGGG CAGGTCAGCG CCGAGCGGAT CGACGCCTTC
GACGACGTGG ACATCCTCGT GACCTATGGC AGCCGCGACC TGTTCGAGGC GATGCGGCAC
GATCCGCTGA TCTCGCACAT GCCGGCGGTC AGGAACGATG CGCTGGTGAT GCTGGGCAGC
GATCCGATGG GCACGGCGGC CAACCCGACG CCGCTGTCGA TCCCCTGGGT GCTCGACGAT
TACGTCGCGC GGCTGGCCAG GGCCGCCGGC CCGGCCAGAT GA
|
|---|
| Protein sequence | MPSKTRICLT LAVALLSLAG LRTAWAQGAE ERFPVAVEHA FGTTTIPARP QRVATVAWAN
HEVPLALGIV PVGFAAANFG DDDGDGVLPW VEERLEELGA ETPVLFDEGD GIDFEAVAAT
RPDVILAAYS GLSRADYDML SQIAPVIAYP KTPWATNWRD MIRLNSAGLG MEAEGDALIA
RIEGRIAEAV AAHPQLAGKS AMFVTHLDTT NLSLVSFYTT HDTRVQFFAD LGLRSPQSVV
AASADGSFSG QVSAERIDAF DDVDILVTYG SRDLFEAMRH DPLISHMPAV RNDALVMLGS
DPMGTAANPT PLSIPWVLDD YVARLARAAG PAR
|
|---|
| |