| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3521 |
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| Symbol | |
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| ID | 4582076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 668767 |
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| End bp | 670866 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639770834 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_917287 |
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| Protein GI | 119386232 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATTG AACCCCGATT CAGAAATGCC CGGCCCCGCT GCCTGACCGC CGCATTGCTG
GGCTGCACCG CGCTGGTCGC CGCCTTCCAG CCCCAGGCGG TGCATGCCCA GGACAACCGC
AGCATCGTTC TGGACACCGT CGTCATCGAG AGCAACCGCA CCGACGACGA CGCAGGCTCG
ATCGTCGCGA CCCGGACGAT GGCGGGCAGC AGGATGGCGA CGGATGTGCT GGACACGCCC
GCCTCGGTCT CGGTCATCAC CAGCAAGGAG ATCCGGCAGC GCGGCGCGGA AACCGTCGAG
CAGGTGCTGC GCTATACCGC CGGCGTCACG ACCGACTTCT ACGGCGGCGA CGACCGCTTC
GACTATTACA AGCTGCGCGG CTTCGACGCC TCGGTCTATC GCGACTGGCT GCCGATGCAG
AAGGCGTTCG GCGGCATCCG CGAGGACGCC TTTGCCTATG AGCGGGTCGA GGTGGTCAAG
GGCGGCAACT CGACCGTCGG CGGTCCCTCG GAACCCGGCG GCGCGGTGAA CTATGCCACC
AAGCTGCCCC GCACCCAGCG GTTCGGCGAA GCCTATGTGA CCGCCGGATC CTTCGACCAC
CGCGAGGTCG GGGTCGATTT CGGCGACAAC CTGACCAGGG ACGGCACGCT GTCATGGCGC
CTGACCGGCC GGGTGCAGAG GGCGGACAAG GAGCTCGACT ACAGCAAGAA CGACGCCAGC
CTGCTGATGG GCGGCCTGAC CTGGCGGCCC AGCGACCGGA CCTCGCTGAG CGTGGTGCTG
GATTACATGA AGCGCGACGG CTCGACCGGA TCGGGCTTTC CGCCGGGCAC GAACTTTTCG
CGCGACCGCT TCTTCGGCGA GCCGGATTTC AACTATCTGG AGAACGAGCG CACATCGCTG
AGCGTGCTCT TCGACCATGA TTTCGGCAAT GGCCTGAAAT TCGGGGCCAA TGCGCGATAC
AGCGACGAGG ACCGCGGCTT CGGCTATGTC TATATCTGGG ATGCCGACGG CCTGAACCCG
GCGGACCGCT ATTATTTCGC CAACGCCTCT TCGGCCGAGC AGTTCGCGGC GGACGTGCAT
CTGCAATACG ACGCAGATTT CGGCACCGTC GGCAGCCGCA CGCTGGTCGG CCTGCAATAC
AGCGACATCT CGGCCGATTC GAGGACCTGG TATGCGCCGG CTTCATCGAT CGACTACACC
GACCCGGTCT ATACCGGCGG GCTCGATCTG GACGCGCTCG CCCCCTATAC CGGGACCAGG
ACCGACGACA GCATCGCCTC GATCTACCTG CAGGAAGAGC TGACCTTCTC GGACCGGCTG
ATCGCCACCA TCGGCCTGCG CCACGACCGG ATGGACCTGT CGCGCACGGC GCTTGACGGA
ACCAGGACCC AGGCCGATTT CAACAAGACC ACCTCGCGCC TGGGCCTGAC CTACAAGATC
ACCCCCGAGC TTTCGACCTA TTTCAGCTAT GCCGAATCGG TGCTGCCCGC CGCTTTGACC
GTCGAGCCCG AGGAAGGCGA GCAATACGAA CTGGGGATGA AATACCGTCC GGCCGCCATG
AACGCATTGT TCACGGCGGC GGTCTATGAC CTGCGCAAGA CAAATATCAC CCGGCAGGAC
ACCTCCGAGA ACCCGCCCGT GCCCCGCACC ATCGGCGAAA TCCGGGCCCG CGGCATCGAG
CTGGAGGCGC GGGCCGAGAT CTCGCCCGAA CTGAACCTGA TCGCGGCCTA TTCCTATACG
GATACCGAGA TCACCGACCG GCTGTCGCCC AACCAGGGCA ACAGTCTGGG CAACGTCCCG
CGGCATCTGG CCTCGGTCTG GATGGACTAT ACGCTGCAAG GCCACGGTGC CCGCGGCGAC
ATGACCTTCG GCATCGGTGC ACGCTACAAG GGCACGGCCT ATAACGGCGA TGACAACGGC
TCCAAATCAG ATGCCGCGGT GCTGATCGAT GCCGCCTACA GCTATGCCCT GCGCAAGGAC
ACGGTGCTTT CGGTCAATGT GACCAACCTG CTGGACGAAA AGCATCGCGA GGCCGCCTCG
GGCGCCATCA CCTACAATCC CGGCCGCGAG ATCACCGCCA CGTTGCGCCG GACCTGGTAA
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| Protein sequence | MPIEPRFRNA RPRCLTAALL GCTALVAAFQ PQAVHAQDNR SIVLDTVVIE SNRTDDDAGS
IVATRTMAGS RMATDVLDTP ASVSVITSKE IRQRGAETVE QVLRYTAGVT TDFYGGDDRF
DYYKLRGFDA SVYRDWLPMQ KAFGGIREDA FAYERVEVVK GGNSTVGGPS EPGGAVNYAT
KLPRTQRFGE AYVTAGSFDH REVGVDFGDN LTRDGTLSWR LTGRVQRADK ELDYSKNDAS
LLMGGLTWRP SDRTSLSVVL DYMKRDGSTG SGFPPGTNFS RDRFFGEPDF NYLENERTSL
SVLFDHDFGN GLKFGANARY SDEDRGFGYV YIWDADGLNP ADRYYFANAS SAEQFAADVH
LQYDADFGTV GSRTLVGLQY SDISADSRTW YAPASSIDYT DPVYTGGLDL DALAPYTGTR
TDDSIASIYL QEELTFSDRL IATIGLRHDR MDLSRTALDG TRTQADFNKT TSRLGLTYKI
TPELSTYFSY AESVLPAALT VEPEEGEQYE LGMKYRPAAM NALFTAAVYD LRKTNITRQD
TSENPPVPRT IGEIRARGIE LEARAEISPE LNLIAAYSYT DTEITDRLSP NQGNSLGNVP
RHLASVWMDY TLQGHGARGD MTFGIGARYK GTAYNGDDNG SKSDAAVLID AAYSYALRKD
TVLSVNVTNL LDEKHREAAS GAITYNPGRE ITATLRRTW
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