Gene Pden_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3510 
Symbol 
ID4582065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp654707 
End bp655651 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content69% 
IMG OID639770823 
Productpirin domain-containing protein 
Protein accessionYP_917276 
Protein GI119386221 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGA ACCCCACGCA GAACCCGGAT TGCCCCGACC GCAAGGGCCT GGAATCCATC 
GAGACGCTGA TCATTCCGCG CGCCCGCGAC CTGGGCGGCT TCGAGGTGCG CCGCGCGCTT
CCCGCGCCGC GCCGGCAGAT GGTCGGCCCC TTCATCTTCT TCGACCAGAT GGGCCCGGCC
GAATTCCTGA CCGGCGGCGG CATCGACGTG CGCCCGCACC CGCATATCGG GCTGGCGACG
GTGACCTATC TCTACCAGGG CGAGTTCCAT CATCGCGACA GCACCGGCGC CGACCAGATG
GTCTATCCCG GCGAGGTCAA CTGGATGATC GCCGGCAGCG GCGTCACCCA TTCCGAGCGC
ACCAGCGAGG AGATGCGCAA GCGGCCCGGC TCGCTCTTCG GCATCCAGAC CTGGGTCGCG
CTGCCGGAGG GCGAGGAGGA CCGCGCCGCG GGTTTCGAGC ATCACGGCCG CGACGCGCTG
CCCTTCCTCG AGGACGGGGG CAAGCAGGTG CGGCTGATCC TGGGTTCGGC CTGGGGCGAG
CGCGCGCCGG TCAAGACCTT TACCGAGACC TTCTATGCCG ATGTGGTCCT TGCCGCCGGC
GCCAGCCTGC CGCTGCCCGA CGATCACGAG GATCGCGGCG TCTATGTGGT CGAGGGCAGC
ATCCTGGTGG CCGGCGAAAC CTTCGAGGCC GGCCGGATGA TGGTGTTCCG CCCCGGCGAC
CGCATCAGCC TGAAGGCCGG CGAGGCCGGC GCCCGGCTGA TGGTTCTGGG CGGCGAGACC
ATGAACGGGC CGCGCTACAT TTCCTGGAAC TTCGTCGCGT CGTCGCAGGA ACGGATCGAT
GCCGCCAAGG AGGCATGGGC GCAGGGCGAC TGGGAGCACG GCCGCTTCCG GTTGCCGCCG
GGCGACGAGG ACGAGTTCAT TCCCTTGCCC GATCGGTTGA GGTGA
 
Protein sequence
MSWNPTQNPD CPDRKGLESI ETLIIPRARD LGGFEVRRAL PAPRRQMVGP FIFFDQMGPA 
EFLTGGGIDV RPHPHIGLAT VTYLYQGEFH HRDSTGADQM VYPGEVNWMI AGSGVTHSER
TSEEMRKRPG SLFGIQTWVA LPEGEEDRAA GFEHHGRDAL PFLEDGGKQV RLILGSAWGE
RAPVKTFTET FYADVVLAAG ASLPLPDDHE DRGVYVVEGS ILVAGETFEA GRMMVFRPGD
RISLKAGEAG ARLMVLGGET MNGPRYISWN FVASSQERID AAKEAWAQGD WEHGRFRLPP
GDEDEFIPLP DRLR