Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3508 |
Symbol | |
ID | 4582063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 652649 |
End bp | 654229 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639770821 |
Product | protein of unknown function DUF894, DitE |
Protein accession | YP_917274 |
Protein GI | 119386219 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAC CGAACCCCGG GACATCCGGT CCCCTGACTT TCCCGGTCTT TCGCGCGCTG TGGATCGCGA CGATCATATC CAACATCGGC ACCTGGATGC ACGATGTCGG CGCCGCCTGG CTGATGACCT CGCTGTCGCC CAGCCCGCTT CTGGTCGCCC TGGTGCAGGC GGCGACGACC CTGCCGATGT TCCTGCTGGC GCTGCCCGCC GGGGCGATGG CGGATATCGT CGACCGGCGA AAGCTGCTGC TGGCGGCGCA GGTGCTTGGC CTTTCCGCGG CGGCGACGCT TTCGGTCCTG ACCCTGCTGG GCCTGACCGG CCCCTGGGTC CTGCTGGCCG CGACCTTCGT GCTGGGCGTC TCGGCCGCGA TCAGCGCGCC GGTGTTCCAG GCCATCGTCC CCGAACTGGT GGACAAGCAG GCGCTGCCCG ATGCCGTGGC GCTGAACAGC TTGGGCGTGA ACATCTCGCG CGCCATCGGC CCGGCGCTGG GCGGCGTGAT CGTCGCGCTG GCGGGCACCC CGGCGGTCTT TGCGCTGAAT GCTGTTTCGG TGCTTGCCGT CCTGGGCGTG CTGTTTCTCT GGAGGCGTGC CGAGACGGCG CACAGCCTGC CGCCCGAGCA CTTCTTCGGC GCCCTGAAGG CCGGATACCG CTATGCGCGG CATTCGCCTG CCATGCGGCT GGTGCTGATC CGGGCGGCGG GGTTCTTTCT GTTCGGCAGC GCGCTCTGGG CCATGCTGCC GCTGGTCGGC CGCCGGATGC TGGGGCTGGA CGCCGCAGGC TATGGCGCGC TTCTGGGCTG CATGGGTGCG GGCGCGGTGC TTGGCGCGCT GCTGCTGAAG AGGCTGCGCA GGACGGTTCC CGCCAACCGC ATCTCGGTCT GGGCGACGCT GCTGTTTGCG CTGGCGACAT TGACCCTGAG CCTTGTTCCC AATGCCTGGA TCGCGGGCGC GGTCATGTTC CTGGCGGGAC TGGCCTGGAT CGGGATGCTG ACCTCGCTGA ACGTGGCGGC GCAGACGGCC TCTCCGGGCT GGGTGAAGGC GCGGGCGCTG GCCGTCTATC TGCTGGTCTT CCAGGGCGCG ATGACGGGCG GCAGCGTGTT TTGGGGCACC GTCGCCTCGG CGGCCGGCGT GCCGGCGGCG CTGGCGGCCG CGTCGGTGGG GCTGGTCGCC TCGGTGCTGC TGGCGCGGGT CTGGCGGCTG CCGAAGGATG CGACGACCGA CCTTGCCCCC TCGAACCATT GGGCGGAACC CGTCGTCGCC GTCCCGCCGG GGGATGATCG CGGGCCGGTG CTGATCGAGA TCGAGTATCG CGTCGATCCG GCCCGGACGG CCGAGTTCAC GGCCGCGCTG CGCCGGTTCA GTGCCACCCG CCAGCGCGAC GGCGCGATCC GCTGGGATCT GTGGGAGGAC GTCGCCGAGC CGGGGCGGCT GGTCGAGGCT TTCGTGGTGG AAAGCTGGGT CGAGCACCAG CGCCAGCACG CCCGCGTCAC CCATGCCGAC CAACTGGACC AGCAGATGCT CAACGCCTTC CATATCGGCG AAGCGCCGCC GCTGGTCAGG CACCTGCTGC GGCCGTCCTG A
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Protein sequence | MAEPNPGTSG PLTFPVFRAL WIATIISNIG TWMHDVGAAW LMTSLSPSPL LVALVQAATT LPMFLLALPA GAMADIVDRR KLLLAAQVLG LSAAATLSVL TLLGLTGPWV LLAATFVLGV SAAISAPVFQ AIVPELVDKQ ALPDAVALNS LGVNISRAIG PALGGVIVAL AGTPAVFALN AVSVLAVLGV LFLWRRAETA HSLPPEHFFG ALKAGYRYAR HSPAMRLVLI RAAGFFLFGS ALWAMLPLVG RRMLGLDAAG YGALLGCMGA GAVLGALLLK RLRRTVPANR ISVWATLLFA LATLTLSLVP NAWIAGAVMF LAGLAWIGML TSLNVAAQTA SPGWVKARAL AVYLLVFQGA MTGGSVFWGT VASAAGVPAA LAAASVGLVA SVLLARVWRL PKDATTDLAP SNHWAEPVVA VPPGDDRGPV LIEIEYRVDP ARTAEFTAAL RRFSATRQRD GAIRWDLWED VAEPGRLVEA FVVESWVEHQ RQHARVTHAD QLDQQMLNAF HIGEAPPLVR HLLRPS
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