Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3500 |
Symbol | |
ID | 4582055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 645946 |
End bp | 646842 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639770813 |
Product | LysR family transcriptional regulator |
Protein accession | YP_917266 |
Protein GI | 119386211 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.963487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0497689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC TCAAAGCCCT GAAGACCTTT CTGCTGGCCG CGGAAAAGCG GAACTTCGCG CAGGTCGCGC GGGAACTGGA CATGACCCCG GCCTCGGTCA CGCGCACCAT CGCGGCACTC GAGGACATGC TGGGCGTGCA GCTTTTCGTG CGCACGACGC GGCAGGTCTC GCTAACGGGG GACGGGGCGA TCTTCGCCTC GCGCATCGAG CAGGCCGTCG AGGCGCTGGA GGCCGCGCGC ACGGAAATGG CCAATGCACA CAAGGCCGAC GAGGGCCGGC TGCGCATCAA TGCGCCGATG TCGCTGGGGC AACGGGTGCT GCCGCAGATC CTGTGCGGCT TTCGCGACCT TTATCCCAGG ATCGACGTGG AGATCCGGCT GACCGACCGT TTCCTCGACA TGGTCGAGGA GGATTTCGAC CTGGCGATCC GCATCTCCGC CGCGCCTTCG GACAAGTTCA CGATCTGGCG CAAGATCTGC CCGGTCAAGC GCTTGCTGGT CGCGGCGCCG GGCACGCCGC ATGCCGAGGT CAAGCATCCC AACGAGTTGT CGCCCGGCGA TTGCCTGGCC TACAGCGCGG ACAGTCACCG GGAAAACTGG CAGCTCTCGG ACGGGAATGC CTCGGTCACC ATCGCGGCGG GGCGGTCCAT CAGCGCGAAT AACGGCGATC TGCTGGCGCA TATGGCGGCC GATGGCGCGG GCGTGGTGCT GCTGCCGGTC TTCATCCTGG CGCAATACCT GCGCAGCGGG CGGCTGGTGC AGATCCTGCC CGACTGGACG CCGCCGCAGA TCTGGCTGAC GCTCTATTAT CCGCCCTACC AGAAGCTGCC GCCCAGGATC GCCGCGTTCT CGGATTTCTT CGAGCGTCAG ATCCCCGCAC TGGTCACCAC GCTATGA
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Protein sequence | MNELKALKTF LLAAEKRNFA QVARELDMTP ASVTRTIAAL EDMLGVQLFV RTTRQVSLTG DGAIFASRIE QAVEALEAAR TEMANAHKAD EGRLRINAPM SLGQRVLPQI LCGFRDLYPR IDVEIRLTDR FLDMVEEDFD LAIRISAAPS DKFTIWRKIC PVKRLLVAAP GTPHAEVKHP NELSPGDCLA YSADSHRENW QLSDGNASVT IAAGRSISAN NGDLLAHMAA DGAGVVLLPV FILAQYLRSG RLVQILPDWT PPQIWLTLYY PPYQKLPPRI AAFSDFFERQ IPALVTTL
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