| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3499 |
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| Symbol | |
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| ID | 4582054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 644585 |
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| End bp | 645904 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639770812 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_917265 |
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| Protein GI | 119386210 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.160253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0533483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGA TCGCCGCCGG GCTGACGGGT TTCGGGGTAT TGCTGGCGCT GATGGCCATC
CGCATCCCCA TCGCGGTCGC GATGCTTGCG ACGGGCATCG TGGGATACGG GCTGGTCAGC
GGGTGGATGC CGCTGCTCGC CTTTCTCAAG ACCAATACCT ATTACCAGTT CTCCACCTAT
TCGCTGTCGG TGATCCCGCT TTTCGTGCTG ATGGGCGAAT TCGCCACCCA TGCGGGGATG
AGCCGGGCGC TTTACCGCGC CGCCGCGGCC TTCATGGGGC ATCTGCGCGG CGGGCTGGCC
ATGGCCTCGA TCGGGGGTTG CGCGGCCTTC GGGGCGATCT GCGGGTCGTC CCTGGCGACG
GCGGCGACCA TGGGCCAGGT CGCCCTGCCC GAGATGAAGC GCTATAACTA CTCGGGCGCG
CTGGCCACCG GCTCGCTGGC CGCGGGCGGC ACGATGGGCA TCCTGATCCC GCCCTCGGTG
ATCCTGGTGC TTTACGCGCT GATGACCGAA CAAAGCATCG CCAAGATGTT CGTCGCGGCC
ATGGTGCCCG GCGTGATCGC GGCGCTGGGC TACATGCTGG CGGTCGCCAT CTTCGTGCGC
CGCCGCCCCG AGGCCGGCCC GGCCGGGCCC CGCGCCAGCT GGTCCGAGCG ATTGGCGTCG
CTGAAGGAAA CCTGGTCGAT CATCCTGATC TTCGCGCTGG TGATCGTCGG CATGTATCGC
GGCTGGTTCA CGCCAACCGA GGCCGCAGCG GTCGGCGCCT TCGGTGCCTT CGTGCTGGCG
GTTCTGCATG GCGGGCTGCG GCTGAAGGGG CTGATCGATT GCCTGCAGGG CACGGCGCGG
ACCTCGGCCA TGATCTTCCT GATCATGCTG GGTGCCGAGA TGTTCAACGC CTTCCTTTCG
GCCACGCAGA CGCCGATGCT TGCCTCGCAG ATGATCGTCG AGGCGGGGCT GTCGCCGATG
ATGGTGCTGG TCGCCATCCT GCTTTTGTAT CTGGCGATGG GCTGCGTGAT GGATTCCATG
TCCATGCTGC TGCTGACCAT CCCGATCTTT TATCCGATCA TCGCCGGGCT GGATTTCGGC
ATGGGCCGCG AGGATACGCT GATCTGGTTC GGCATCCTGG CGGTCGTCGT GGTCGAGGTC
GGGTTGATCA CCCCTCCGGT CGGGATGAAC GTCTTTGTCA TCAACGCCAT GGCCAAGGAC
GTGCCGATGT GGGAAAGCTT CAAGGGGGTC ATGCCCTTCC TGATCTCGGA CCTGCTGCGG
ATCGTGCTGC TGGTCGCCTT TCCGGCGATC ACCCTGGGAC TGGTGCGGGC GCTGGGATAG
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| Protein sequence | MTGIAAGLTG FGVLLALMAI RIPIAVAMLA TGIVGYGLVS GWMPLLAFLK TNTYYQFSTY
SLSVIPLFVL MGEFATHAGM SRALYRAAAA FMGHLRGGLA MASIGGCAAF GAICGSSLAT
AATMGQVALP EMKRYNYSGA LATGSLAAGG TMGILIPPSV ILVLYALMTE QSIAKMFVAA
MVPGVIAALG YMLAVAIFVR RRPEAGPAGP RASWSERLAS LKETWSIILI FALVIVGMYR
GWFTPTEAAA VGAFGAFVLA VLHGGLRLKG LIDCLQGTAR TSAMIFLIML GAEMFNAFLS
ATQTPMLASQ MIVEAGLSPM MVLVAILLLY LAMGCVMDSM SMLLLTIPIF YPIIAGLDFG
MGREDTLIWF GILAVVVVEV GLITPPVGMN VFVINAMAKD VPMWESFKGV MPFLISDLLR
IVLLVAFPAI TLGLVRALG
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