| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3497 |
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| Symbol | |
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| ID | 4582052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 643024 |
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| End bp | 644049 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770810 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_917263 |
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| Protein GI | 119386208 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0438389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.217565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC TGATCCTGTC GGCCATCGCC TCGCTTTCGC TGGGCGGCGC GGCCTTTGCC
GCCGATGTGA CGCTGCGCGT CCATCACTTC CTGTCGGCCG ATGCGCCGCT GCAAACCGAG
ATCCTGATCC CCTGGGAAAA GGCCGTCGAG GAACAGTCGG GCGGCCGCAT CGACGTGCAA
CTGTTTCCCT CGATGCAATT GGGAGGCAAG CCGCCGCAGC TGTTCGACCA GGCCCGCGAC
GGCATCGTGG ACATTTCCTG GACGCTGCTG GGCTACACGC CCGGCCGCTT CCCCGTGGCC
GAGGTGTTCG AGCTGCCCTT CATGTCCGGC ACCGCCGTCC AGACCACCGC CGCGCTGCAA
GACTTCCAGG CGAAATACCT GGGCGACGAG ATGGGGCAGG TGAAGCCGCT CTTGCTGCAT
GCCCCGGCGG GCTACAAGTT CCACATGCGC AGCGGCCCGA TCACCTCGCT GGCCGACCTC
AAGGGCAAGA AGATCCGCGC CCCCTCGCGC GCGATGACCG ATGCGCTGAA CGCGCTGGGC
GCCACTGCGG TGGGCATGCC GGTGCCCGAG GTCGCTCAGG CCCTGACCAC CGGCGTGATC
GACGGCGCCC AGATCCCGTG GGAGGTCGTG GGCTCGCTGC GGGTCAACGA GATCACCAAC
GCCCATAGCG AAATCGGGGT CGAGAACGGC GGCGTTTCCA CCGCGGTCAT GGCGCTGGTG
ATGAACCGGG CGAAATACGA CAGCCTGCCC GACGACCTGA AAAAGGTGAT CGACGACAAT
TCCGGTGCCA ACCTGGCGGT GCTGGCCGGC GAGGCCCTGG ACCGGGTCGA GGCCGAGGAA
CGGCAGAAAG CCCTGGACGC TGGCGCGCAG ATCAACGTGA TCCCGGCCGA GCAGATGGAG
GAATGGCGCA GCGCGGTGCA GCCGGTGGTG GACGGTTGGG TCAAGGCCAT GGACGGCCGC
GGCCTGGACG GACAGGCGAT GCTGGACGAC GCGCGCGCCA TGCTGGCCGC GGCCGGCGCC
GAGTAA
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| Protein sequence | MKTLILSAIA SLSLGGAAFA ADVTLRVHHF LSADAPLQTE ILIPWEKAVE EQSGGRIDVQ
LFPSMQLGGK PPQLFDQARD GIVDISWTLL GYTPGRFPVA EVFELPFMSG TAVQTTAALQ
DFQAKYLGDE MGQVKPLLLH APAGYKFHMR SGPITSLADL KGKKIRAPSR AMTDALNALG
ATAVGMPVPE VAQALTTGVI DGAQIPWEVV GSLRVNEITN AHSEIGVENG GVSTAVMALV
MNRAKYDSLP DDLKKVIDDN SGANLAVLAG EALDRVEAEE RQKALDAGAQ INVIPAEQME
EWRSAVQPVV DGWVKAMDGR GLDGQAMLDD ARAMLAAAGA E
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