| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3495 |
|---|
| Symbol | |
|---|
| ID | 4582050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 640856 |
|---|
| End bp | 641701 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639770808 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_917261 |
|---|
| Protein GI | 119386206 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0599737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.192843 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACC CGGCCGGCAA ACCCTGCATC ATCTGCGTCG CCATCACCGG CAGCCTGCCG
ACCAAGGAAA ACAACCCGGC GGTGCCGATC ACCTTGGCCG AACAGGTCGA ATCGACGCAT
GAGGCGTTCG AGGCCGGCGC CTCGATCGCC CATTGCCATG TCCGCGACGA CGAGGGGCGC
CCGACCAGCG ACCCGGACCG CTTCGCCGCA CTGAAGGAAG GGCTGGAGAG GCATTGCCCC
GGCATGATCG TCCAGCTTTC GACCGGCGGG CGGTCGGGGG CGGGGCAGGC GCGGGGGGCC
ATGCTGCCGC TTTGTCCCGA CATGGCGTCC TTGTCCGTGG GGTCCAACAA CTTCCCGACC
CGGGTCTATG AAAACCCGCC GGACCTGGTG GACTGGCTGG CCGCCGAGAT GCTGAAATAC
GACATCAAGC CGGAAATCGA GGCGTTCGAC CTGTCCCATA TCCTGCAAGC GAAAAGGATG
GCCGGGGACG GGCGGCTGGC CGGCACCCCC TATGTGCAAT TCGTGATGGG GGTCAGGAAC
GCCATGCCCG CCGACCGCGA CGTCTTCGAC TATTACATCC ATACGGTCAG GCGGCTCTTC
GGCGAGGACG CGCCCTGGTG CGCGGCCGGG ATCGGGCCGA GCCAGATCGT GCTGAACGAA
TGGGCGATCT CCTCGGGCGG GCACGCACGC ACCGGGCTCG AGGACAACGT GCGGCTGGAC
CGGGACCGGC TGGCGCCCTC GAATGCCGCG CTGGTCGGCC GTGCGGTCGA ACTGTGCGAG
AAATACGAAC GCCCCGTCGC GACATGGCGG CAGGCGCGGC AGATCCTTGG GCTGCGGATG
GTCTGA
|
|---|
| Protein sequence | MSDPAGKPCI ICVAITGSLP TKENNPAVPI TLAEQVESTH EAFEAGASIA HCHVRDDEGR
PTSDPDRFAA LKEGLERHCP GMIVQLSTGG RSGAGQARGA MLPLCPDMAS LSVGSNNFPT
RVYENPPDLV DWLAAEMLKY DIKPEIEAFD LSHILQAKRM AGDGRLAGTP YVQFVMGVRN
AMPADRDVFD YYIHTVRRLF GEDAPWCAAG IGPSQIVLNE WAISSGGHAR TGLEDNVRLD
RDRLAPSNAA LVGRAVELCE KYERPVATWR QARQILGLRM V
|
|---|
| |