| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3493 |
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| Symbol | |
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| ID | 4582048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 639431 |
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| End bp | 640153 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639770806 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_917259 |
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| Protein GI | 119386204 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.364827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.332328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCCCG CCGAGTATTA CCAGCGCGAC CGGCGCATCC ACCCGCCGGC TTTGACGCCG
GATTACAAGA CCTCGGTCGC GCGCAGCCCG CGCTTCAGCC TGATCAGCCT GCAAGGCTCG
ATGTCGGAGA TCACCGGCCC GACCTTCGGC CATGGCGACA TCAGCCCGAT CGACAACGAC
CTGATCAAGA ACTACGCCAA GGACGGCGAC CCCATCGGGG AACGCATCAT CGTCCATGGC
CGCGTGCTGG ACGAAAATGC CCGGCCCGTG CCCGACACGC TGGTCGAGGT GTGGCAGGCC
AATGCCGGCG GCCGCTATCG CCACAAGAAG GACAGCTATC TGGCCCCCAT CGACCCCAAT
TTCGGCGGCT GCGGGCGCAC CATCACCGAT GCGGACGGCT ATTACTTCTT TCGCACCATC
AAGCCCGGCG CCTATCCTTG GCGCAACTGG GTCAACAACT GGCGCCCGGC GCATATCCAT
GTCTCGGTCT TCGGCCATGC CTTCTGCCAG CGGCTGATCA CCCAGCTTTA CTTCGAGGGC
GACCCGCTGA TCCCGATCTG CCCCATCGTG CAGACCATCC CGGACCCCGA GGCCGTCGAC
CGCCTGACCG CGAAGCTGGA CATGAACGCC ACGGTGCCGC TGGACAGCAT CGCCTATCGT
TTCGACATCG TGCTGCGCGG GCGCCGCTCG ACCATGTTCG AGAACCGGCT GGAGGGGAAC
TGA
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| Protein sequence | MTPAEYYQRD RRIHPPALTP DYKTSVARSP RFSLISLQGS MSEITGPTFG HGDISPIDND
LIKNYAKDGD PIGERIIVHG RVLDENARPV PDTLVEVWQA NAGGRYRHKK DSYLAPIDPN
FGGCGRTITD ADGYYFFRTI KPGAYPWRNW VNNWRPAHIH VSVFGHAFCQ RLITQLYFEG
DPLIPICPIV QTIPDPEAVD RLTAKLDMNA TVPLDSIAYR FDIVLRGRRS TMFENRLEGN
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