| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3482 |
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| Symbol | |
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| ID | 4582037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 628308 |
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| End bp | 629591 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639770795 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_917248 |
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| Protein GI | 119386193 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.157838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.654271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCTGGC TTGGCTCGAT TTTCGTCCTG ACGCTGGCCC TGGGCATGCC GATCGCCTTC
GTGCTGGGCA TCAGCGCGCT GGGTTACTTC TATTTCACCG GCCAGACGCA ATTCCTGATC
GTGTTGCCGC AGCGGATGCT GGCGGGAATG GACATGTTCG TGCTGCTGGC GATCCCGCTT
TTCGTGCTGG CGGGCGCGAT CATGGACGTG GGTGGGCTGA CCCGTCGCCT GATCGGCTTT
GCCAACTCGG TCGTCGGGCG ATTCCGGGGC GGGTTGTCGC TGACGGCAAT CTGGGGCTGC
TTCCTCTTCG GCGGCGTCAG CGGATCGGCG GCGGCGGATG CCGCGGCCAT CGGCACGGTG
ATGGTGCCGG ACATGAAGCG GCAGGGCTAT GACGTGGACT ATTCGGCGGC GCTGATCGCG
GTCTCGTCGC TGATGGCGCC GCTGGTGCCG CCCTCGATCG CCATGATCAT CTACGGCGCG
CTGTCGGGCA CCTCGATCTC GCAACTGCTG GTCGCGGGGC TGGCGCCGGG CTTCATGCTG
GCAGTGTTCC TGTCGACCTA TGCAGTCTGG GTCGCGCATC GCCGCGGCTA TCCCAAGGCG
GCAAGGCAAT CGCTGGCCGC GATCCTCCGG GGTTGCTGGC AGTCCGTCCC GGTGATGCTG
CTGCCGGTCA TCATTGTCGT CGGCATACGG GGCGGCATCT TCACCGCGAC CGAGGCCGCC
GCGGTCGCCG CGATCTATGC GCTGATCATC GCCACCGTCG TCTATCGCGC GATGAGCTGG
AGATTCCTCA AGGAAGCCTT CGTCGCCACG GCGATCATCA CCTCGGCGAT CTATTTCCTG
GTCGCGGTCG CCAACGTCGC CGGCTTCATC TTCGCCATCG AGCAACTGCC GCAAAAGACC
GTCGCCCTGC TGACCGGGGT TTCGGACAAC AAATACGTGA TCCTGCTGAT GGTGAACCTG
ATCCTGCTGT TCCTGGGCAT GTTCCTGGAC ACCATCGGCG TGCTGATCCT GACGGTGCCC
GCGCTGATGG CCATCGGCAA CATGCTGGGG CTGGAGCCGG TGCATCTGGG GGTCATGGTG
GTCTTCAACG TGCTGGTCGG CTTTGTCACC CCGCCGGTCG GGCTGTGCCT GTTCGTCATC
GCCGGCGTGA CCGGCCGGCC GATGGAGCGG ATCGCCTACA GGGCCCTGCC GATGATCGGC
ATTGCGCTGG TCGTCCTGGC GCTGATCACG ATCTTTCCCG AGATCTCGCT GTTCCTGCCG
CGGGTGCTGG GGGTGGCGGG ATGA
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| Protein sequence | MIWLGSIFVL TLALGMPIAF VLGISALGYF YFTGQTQFLI VLPQRMLAGM DMFVLLAIPL
FVLAGAIMDV GGLTRRLIGF ANSVVGRFRG GLSLTAIWGC FLFGGVSGSA AADAAAIGTV
MVPDMKRQGY DVDYSAALIA VSSLMAPLVP PSIAMIIYGA LSGTSISQLL VAGLAPGFML
AVFLSTYAVW VAHRRGYPKA ARQSLAAILR GCWQSVPVML LPVIIVVGIR GGIFTATEAA
AVAAIYALII ATVVYRAMSW RFLKEAFVAT AIITSAIYFL VAVANVAGFI FAIEQLPQKT
VALLTGVSDN KYVILLMVNL ILLFLGMFLD TIGVLILTVP ALMAIGNMLG LEPVHLGVMV
VFNVLVGFVT PPVGLCLFVI AGVTGRPMER IAYRALPMIG IALVVLALIT IFPEISLFLP
RVLGVAG
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