| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3480 |
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| Symbol | |
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| ID | 4582035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 626754 |
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| End bp | 627746 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639770793 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_917246 |
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| Protein GI | 119386191 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0459907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA CTGCCGCTGC CGTCCTGGTG GGAAGCCTGC TGTCGAGTGC CGCCTGGGCC
GACCCCGTCA CGCTGCGCCT GGGCCATGCC GTATTCGAGC AGCATCCGAT CCACGACACC
GCCCTCCGCT TCAAGGAAGC GGTCGAGCGG CTGTCGGATG GCGATATCAA GATCGACATT
TTCCCCTCGC GCCAGCTTGG CGACGTGAAG GAGTTGATGG AGGGCGTGCA GTTCGGCACC
GTCGACATGA CGGTGAACTC GACCTCGGCC TATTCGACGC TGGAGCCCTC GATCGACGCC
TTCCAGCTGC CGGGCCTGAT CCCCGATTAC GAAGGGTTCG CGGCCATGGC GAAGACGCCC
GAGGCGCGGG CGATCATGGA CAGGCTGGGA AACCACATGA TGGTCGCCCT GGGGGTCTAT
GACGGCGGGC AACGCCATTT CCTGACCGTC GGGGCGCCGG TCGAAAGCCT GGCCGACATG
CATCACAAGA AGACCCGCGT CGCGCCCAAC TGGATGTTTC TGGATGCGTG GCAGGCGGTG
GGCGTGAACC CCACGCCGAT GGCCTATGGC GAGGTCTATT CGGCGCTGGA AACCGGCACG
CTGGATGCGG TCGAGATCAA CCTGACCTCG ATCGAGAGCG AGAAATATTA CGAGATCGCC
AAGGGCGTGT CGCTGACAGG CCATTACTTC TGGCCCAGCT TCCTGCTGGT CAACCAGATG
AAGTTCAACT CGCTGACCCC CGAGCAGCAG GAGATCATGC GCCAGGCCGC CGACGAGATC
GTCGAGCCGC AGGTGATGGC GGTCAAGGAT CTGGACGAGC AGATCAAGGC CCATCTGGCC
GAACTGAACA TCCCGGTCGT GACGCCCTCG GATGCGTTCA GGGCCGAATT GCAGGCCGCC
TTCGCCCCGG TGGTCGAGAA ATACGAGGCC GCCGATCCGC TGATCGCCGA TTTCGCGGCT
GCGGCGAAAA AGCTGGCTCC GGCCGCTCAA TAA
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| Protein sequence | MMKTAAAVLV GSLLSSAAWA DPVTLRLGHA VFEQHPIHDT ALRFKEAVER LSDGDIKIDI
FPSRQLGDVK ELMEGVQFGT VDMTVNSTSA YSTLEPSIDA FQLPGLIPDY EGFAAMAKTP
EARAIMDRLG NHMMVALGVY DGGQRHFLTV GAPVESLADM HHKKTRVAPN WMFLDAWQAV
GVNPTPMAYG EVYSALETGT LDAVEINLTS IESEKYYEIA KGVSLTGHYF WPSFLLVNQM
KFNSLTPEQQ EIMRQAADEI VEPQVMAVKD LDEQIKAHLA ELNIPVVTPS DAFRAELQAA
FAPVVEKYEA ADPLIADFAA AAKKLAPAAQ
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