Gene Pden_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3477 
Symbol 
ID4582033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp624840 
End bp625202 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID639770791 
ProductMerR family transcriptional regulator 
Protein accessionYP_917244 
Protein GI119386189 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.137212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG GCGACATCGC CAGGGCGGCG GGGGTGACGA CCTCGCGCAT CCGCTTCTAT 
GAAAAGCGCG GGATCATCGC CCCGGCCGTG CGTGGGCCGA ACGGCTATCG CGACTATCCC
GAGGAGCTGA TCGCCATCCT GCGCTTCATC GAGCAGGCGC AGGGCCTTGG CTTTTCGCTG
AAGGAAATCG CCGGCGTTGA CGTCGCCCAA GGCGATCATC CGATCTCTTG CGACGAGGCG
ATCCGCCTCT TGTCGGGCAA GCTCGATTCC GTGGCAGCCC TGATCGCCGA AGCCAAGGAG
CGCCAGCGCC GGATCAAGGC GCTGATCGCC GAATTGCAGG GCCGCAAGCA ATCCGCGGCC
TGA
 
Protein sequence
MKIGDIARAA GVTTSRIRFY EKRGIIAPAV RGPNGYRDYP EELIAILRFI EQAQGLGFSL 
KEIAGVDVAQ GDHPISCDEA IRLLSGKLDS VAALIAEAKE RQRRIKALIA ELQGRKQSAA