Gene Pden_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3476 
Symbol 
ID4582032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp623489 
End bp624766 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content71% 
IMG OID639770790 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_917243 
Protein GI119386188 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.493989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA CCACCCAGAC CCCGCTGTTC CAGCCGCTGC AATTGCCCGG CGGGCAGATC 
GTCAAGAACC GCATCGCCAA GGCGGCGATG GAAGAGAACA TGGCCGACAC CCGCCATCTG
CCCGGACCGG CGCTGCGCCG GCTGTATCGC GAATGGGCCC AGGGCGGGGC CGGGCTGCTG
CTGACCGGAA ACGTCATGGT CGCCCCCGAT GCGGTGACTG GGCCGGCCGG GGTAATCCTG
GACGCCGGCC AGCCGCTGGG GCCGTTCCGC GAATGGGCGC AGGCCGGGCG CGCGGATGGT
GCACGGCTGT GGATGCAGAT CAACCATCCG GGCCGTCAGG TCTATGCCGC GACCAACCCG
CAGGCTATCG CACCCTCGGC CGTGCCGGTG GCGATCGAGG GTTATGCGCA TCTTTTCGCC
CAGCCCCGCG CCATGTCTGA TTCCGACATT GCCGAGGTGA TCCGCCGCTT CGCCGACACT
GCCGCGCTGG CGGAACAGGC CGGGTTCGAC GGCGTGCAGG TCCACGCCGC GCATGGCTAT
CTGCTGAGCC AGTTCCTGTC TCCGCTGACC AACCGGCGCG AGGATCGCTG GGGCGGCACG
TTGGAGAGCC GCGCGCGGCT GCTGGTCGAG ATCGTCCGCG CCATCCGCGC CCGCGTGGCG
CCGGGCTTCG GCGTGGGCGT CAAGCTGAAC TCCTCGGACT TCCAGAAGGG CGGCTTCGCG
GCCGAGGATG CGGTGGCCGT GGTGCGGATG CTGAACGAAT TGCCCGTGGA TCTGGTCGAA
CTTTCGGGCG GCAGCTACGA AAGCCCGGCC ATGCATGGCC GTCCGCAACA AGCCAGCACC
CGACAAAGCA GTTTGGCGCG CGAAGCCTAT TTCGTCGATT TCGCCCGCGA CGTGGTGGCA
GAGGCGCGGA TGCCGGTGAT GGTGACCGGC GGCATCCGCC GCCGCGCGAC CGCCGAGGCG
GCGCTGGCGC CCGAGGATGG TCGCGCGGGC GTGGCCATGG TGGGCATCGC GCAGGCGCTG
GCCTATGCGC CGGACCTGCC GAACCGCTGG CACAAGGCCG AGGCGACGGT GACTGTCCCG
ATGGTGCGCT GGAAAAACCG GGCCATCTCG GGCCTCGCCA CCATGGCGAT GACCAAGCTG
CAACTGCGCC GGCTGGGCGC GGGCAAGGCA CCGAAACCCG GCGCCTGGGC ACCGCTGGTC
CTGGTCCGCG ACCGGATCAG GACCGCCCTG CGCAGCCGCC GCTATCGCGC CTGGTTGCGC
CGCCGCGCCG GGGCGTGA
 
Protein sequence
MTATTQTPLF QPLQLPGGQI VKNRIAKAAM EENMADTRHL PGPALRRLYR EWAQGGAGLL 
LTGNVMVAPD AVTGPAGVIL DAGQPLGPFR EWAQAGRADG ARLWMQINHP GRQVYAATNP
QAIAPSAVPV AIEGYAHLFA QPRAMSDSDI AEVIRRFADT AALAEQAGFD GVQVHAAHGY
LLSQFLSPLT NRREDRWGGT LESRARLLVE IVRAIRARVA PGFGVGVKLN SSDFQKGGFA
AEDAVAVVRM LNELPVDLVE LSGGSYESPA MHGRPQQAST RQSSLAREAY FVDFARDVVA
EARMPVMVTG GIRRRATAEA ALAPEDGRAG VAMVGIAQAL AYAPDLPNRW HKAEATVTVP
MVRWKNRAIS GLATMAMTKL QLRRLGAGKA PKPGAWAPLV LVRDRIRTAL RSRRYRAWLR
RRAGA