Gene Pden_3465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3465 
Symbol 
ID4582021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp609104 
End bp610258 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content65% 
IMG OID639770779 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_917232 
Protein GI119386177 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTAG CCCAACCCCT TGCCGAACTG CTCGAAGCCG CCGACCGGCC GCTCGAGGAC 
GCGCGCGCCA TGCCGCCGGG CGTCTATACC AACCCCGAAT TCCTGTCCCA TGAGATCGAG
ACCATCTTCT CGAAGGAATG GATCTGTGTC GGCCGCTCCA GCCGGCTTGC CAAGACCGGC
GACTATCTGA CCTATGACCT TGCCGGCCAG CCCGTCGTGG TCCTGCGCGG CAAGGATGGC
CAGTTGCGCG CCTTCTCGAA CGTCTGCCTG CATCGCATGT CGACGCTGGT CGAGGGCTGC
GGCAACAAGC GGGTGCTGGT CTGCCCCTAT CACGCCTGGA CCTATGACCT CGACGGCCGC
CTGCGAGGGG CGCCGTTCAT GACCCAGACC ACCGGCTTCT GCAAGGAGAA CTACGCCCTG
CCCCCGATCC GCTGCGAGGA ATGGCTGGGC TGGATCTACA TCACGCTCGA CAAGGACCGC
CCCGGCGTCG CCGCGGCCCT TGGCCCGCTG GAAAAGCTGA TCGCCCCCTA TGAGATGGAG
AACTATGTCG AGTGCTTCCG CGAGACCCAT GTCTGGGACA CGAACTGGAA GGTGCTCGCC
GAGAACTTCA TGGAAAGCTA TCACCTGCCG GTCTGCCATG CCGCGACCGT GGGCGGCCAT
TCCAGGCTCG AGGAAATGGA GTGCCCTCCG GGCCTCGAAG CCTTCAACTA TCACTGGATC
ACCAAGGAAG CCTCGCTGCC GATGGGAAAT GCGCATCCCG ACAATCGCCG GCTCGAGGGG
CGCTGGCGCA AGACCACGGC CCTGATCACG CTTTATCCCA GCCATCTGAT CACGCTGACG
CCGGGCTATT TCTGGTATCT GTCGCTGCAT CCCAAGGGCA CCGGCCAGGT GTCGATCGTC
TTTGGCGGCG GCCTTTCGCC CGAGTTCATG GCCGATCCGC GCGCCGAGGA ATATGTCGCG
ACGCTCAAGG GCCTGCTGGA CGAGGTCAAT GCCGAGGATC GCGGCTGCAC CGAAAAGGTG
TTCCGCGGCC TCAGCGCGGA TGCGGCGCGG GCGGGGCATC TGTCCTATCT GGAACGCCCG
ATCCACGACT TCATGCGCTA CATCGCCGAG CGGACAGGCG GCTACCGGCG CGCGTTCGCC
GTCGCTGCCG AATAA
 
Protein sequence
MSLAQPLAEL LEAADRPLED ARAMPPGVYT NPEFLSHEIE TIFSKEWICV GRSSRLAKTG 
DYLTYDLAGQ PVVVLRGKDG QLRAFSNVCL HRMSTLVEGC GNKRVLVCPY HAWTYDLDGR
LRGAPFMTQT TGFCKENYAL PPIRCEEWLG WIYITLDKDR PGVAAALGPL EKLIAPYEME
NYVECFRETH VWDTNWKVLA ENFMESYHLP VCHAATVGGH SRLEEMECPP GLEAFNYHWI
TKEASLPMGN AHPDNRRLEG RWRKTTALIT LYPSHLITLT PGYFWYLSLH PKGTGQVSIV
FGGGLSPEFM ADPRAEEYVA TLKGLLDEVN AEDRGCTEKV FRGLSADAAR AGHLSYLERP
IHDFMRYIAE RTGGYRRAFA VAAE