Gene Pden_3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3463 
Symbol 
ID4582019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp607236 
End bp608441 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID639770777 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_917230 
Protein GI119386175 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCATG TCGTTGTCAT CGGCGCGGGA CAGGCCGGGG CCGCCCTGGC GGCCAGGTTG 
CGCGCGCTGA AGTTCCAGGG AGAGATCACG GTGATCGGCG ACGAGCCCGC GCCCCCCTAT
CAGCGGCCGC CGTTGTCCAA GGCCTATCTG CTGGGCGAGA TGGAGGAGGA GCGCCTGTGG
CTGCGTTCGG CCGATTTCTG GGCCGAGAAC CGGATCACCC TGAAGCTGGG CACTCCGGTC
ACCGCGATCG ACCCCGTCGC GCGCACCGTG ACGGTGGGCG AGGAGGTGCT GGCCTATGAC
GAACTGGCAT TGACCACCGG CTCGGTTCCC CGCCGCCTGC CGGCGGAGAT GGGCGGGGCG
CTTGGCGGCG TCCATACCGT TCGCACCCTG GCCGATATCG ACGCCATCCG CGCCGGGTTC
GTGCCCGGCC GCCGTCTCGT CGTGATCGGC GGCGGCTATA TCGGGCTCGA GGCCGCCGCG
GTCGCACGCA AGCTGGGGCT GGAGGTGACG GTGATCGAGA TGGCGCCGCG CATCCTGCAG
CGCGTGGCCG CGCCCGAGAC CGCGCTTTAC TTCCGCAAGC TCCATGCCGG CCATGGCGCC
GCGATCATCG AGGGAGAGGG GGTCGACCGG ATTCTGGGCG AGGGCCGTGT CGCCGGCGTG
CGCCTGAAGG ATGGGCGCGT GCTGCCGGCC GATTTCGTCA TCGCGGGGGT CGGCATCGTT
CCCGCCACCG CCCTGGCCGA GGCCGCCGGG ATCGCGCTGG AGAACGGCAT CCGCACCGAT
GCGCGGGGGC GGACATCGGC CGCCAATGTC TGGGCGGCGG GGGATTGCGC GTCCTTTCCG
CTGGACGGCG TGCAGATCCG GCTGGAATCG GTCGGCAACG CCATCGACCA GGCCGAACTC
GTCGCTGCGA ACATCATGGG GGCGGACAAG GACTATGTGC CGAAGCCGTG GTTCTGGTCC
GACCAATATG ATTGCAAGCT GCAGATCGCG GGGCTGAATG CCGGCTACGA CCGCGTCGTT
GCCCGGCCCG GCGAGGGCGA GGCGGTCAGC ATCTGGTATT ATGCCGGCGA CAGGCTGCTG
GCGGTCGATG CCATGAACGA CCCCCGCGCT TTCATGGTCG GCAAGCGCCT GATCGAGGCG
GGCAGGACCG CCGATCCCCG ACTTGTCGCC GATGCCGCCA CCGACCTGAA GGCATTGTTG
CGCTAG
 
Protein sequence
MPHVVVIGAG QAGAALAARL RALKFQGEIT VIGDEPAPPY QRPPLSKAYL LGEMEEERLW 
LRSADFWAEN RITLKLGTPV TAIDPVARTV TVGEEVLAYD ELALTTGSVP RRLPAEMGGA
LGGVHTVRTL ADIDAIRAGF VPGRRLVVIG GGYIGLEAAA VARKLGLEVT VIEMAPRILQ
RVAAPETALY FRKLHAGHGA AIIEGEGVDR ILGEGRVAGV RLKDGRVLPA DFVIAGVGIV
PATALAEAAG IALENGIRTD ARGRTSAANV WAAGDCASFP LDGVQIRLES VGNAIDQAEL
VAANIMGADK DYVPKPWFWS DQYDCKLQIA GLNAGYDRVV ARPGEGEAVS IWYYAGDRLL
AVDAMNDPRA FMVGKRLIEA GRTADPRLVA DAATDLKALL R