| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3461 |
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| Symbol | |
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| ID | 4582017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 604937 |
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| End bp | 606229 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770775 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_917228 |
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| Protein GI | 119386173 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.881992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACA CCTCGGCGAA TGGCGTGAGC TTCGCGCCCG CGCCCGCTCA CCGGACCGGG
CTTGTGACCG CCGACGGTCG TCCGTTGAGA TCTGCGCTTG CGCGGAGTTC GCGTCGTGCG
CGTCGTCGTG CGTTTTTCCT GGTGCTTCCG CTTCTGCTTT TCGTGCTGAT CACCTTCGTG
GTGCCGATCG GGCAGATGCT GCAGCGCTCG GTCAAGAACG AGGGCTTCTC GGCCAACATG
CCGCAGCTCA GCGCCTGGTT CCACGACAAC CCCCGCGGCA CCGAGCCCGA CGATGCGGCC
TGGGCGGCGC TGGCCGCCGA CCTGACCGCC GCCGCCCAGG CCCGCACCAT CGGCGTGGTC
GGCACCCGCA TCAACTACGA CATGCCGGGC ACGCGGTCGC TGTTCACCTC GGCCGGGCGG
CAGGCGCGCG GCGGCATCGA GCCGCCCTAT CGCGAGGCGA TCCTGGAGAT GGACGCCCGG
TGGGGCAATC CCCGGCTGTG GTCGGTGATG CGAGAGGCCG CCTCGCCCTA TACCGCCAAC
TTCTACCTCG CGGCGGTGGA CCGCACCCGC GACGACCAGG GCGACATCGT CTCCGCCCCG
GCGCAGCAGC AGATCTACGG CAAGCTGTTC CTGCGCACCT TCTGGCTGTC GCTGGCCATC
ACCGCCACCA CCTTCCTCCT GGGCTTTCCG GTCGCGCATC TGCTGGCCAC CCTGCCGATG
CGGCAGTCCA ACCTGCTGAT GATCCTGGTG CTGCTGCCGT TCTGGACCTC GCTGCTGGTC
AGGACCACGG CCTGGATCGT GCTGTTGCAG CAGCAGGGCG TGGTCAACGA CGTGCTGGTC
TGGCTGGGGG TGATCGGCAA CAACCAGCGG CTGCAGATGA TCTTCAACCA GACCGGCACG
ATCATCGCCA TGACCCATAT CCTGCTGCCC TTCATGATCC TGCCGCTCTA TTCGGTGATG
CGCACCATCA ATCCCAGCTA CGTGCGCGCC GCGCGCAGCC TGGGCGCGAC CAGCTGGACC
GCCTTCCGCC GCATCTATTT CCCGCAGACC CTGCCGGGGC TGGGGGCGGG GGCGCTGCTG
GTGTTCATCC TGGCGGTGGG CTACTACATC ACGCCGGCGC TGGTCGGCGG CTCGTCGGGG
CAGCTGATCT CCAACATGAT CGCGATGCAC ATGACGCAGA CGCTGAACTG GTCCATGGCG
GCCGCGCTGG CGGCGCTGCT GCTGGGCGGG GTGCTGATCC TCTACTGGGT CTACGACCGT
CTCGTCGGCA TCGACAACCT GAAACTGGGG TAA
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| Protein sequence | MADTSANGVS FAPAPAHRTG LVTADGRPLR SALARSSRRA RRRAFFLVLP LLLFVLITFV
VPIGQMLQRS VKNEGFSANM PQLSAWFHDN PRGTEPDDAA WAALAADLTA AAQARTIGVV
GTRINYDMPG TRSLFTSAGR QARGGIEPPY REAILEMDAR WGNPRLWSVM REAASPYTAN
FYLAAVDRTR DDQGDIVSAP AQQQIYGKLF LRTFWLSLAI TATTFLLGFP VAHLLATLPM
RQSNLLMILV LLPFWTSLLV RTTAWIVLLQ QQGVVNDVLV WLGVIGNNQR LQMIFNQTGT
IIAMTHILLP FMILPLYSVM RTINPSYVRA ARSLGATSWT AFRRIYFPQT LPGLGAGALL
VFILAVGYYI TPALVGGSSG QLISNMIAMH MTQTLNWSMA AALAALLLGG VLILYWVYDR
LVGIDNLKLG
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