Gene Pden_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3458 
Symbol 
ID4582014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp601117 
End bp602274 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content71% 
IMG OID639770772 
Productacetylornithine deacetylase 
Protein accessionYP_917225 
Protein GI119386170 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01892] acetylornithine deacetylase (ArgE) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CCCGCCCCGA GACGCTGGCG CTGCTGGCGC GCCTGGTCGC CTTTCCCACC 
GTCAGCGCCG AAAGCAACCT GGCGCTGATC GATTTCGCCG AACACCATCT GCGGCACGCC
GGCTTTGTCA CGCACCGCCT GCCGTCCCGC GACGGAACCA AGGCCGGACT GATGGCCCGA
CTGGGCGAGG GGCGGGGCGG CGTCATGCTT TCGGCCCATA GCGACGTCGT GCCGGCCGAA
GGGCAGGGCT GGAGCCGGCC GCCCTTTGCC CTGTCGCGCC GGGGGGACAG GCTTTACGGG
CGCGGCACGA CCGACATGAA GGGCTTTCTT GCGGCGATGC TTTCGCGGGC GGCGCGGGCG
GGAAAGGCTA CGCCGGCCCG GCCGCTGATG CTGGCGATCT CTTACGACGA AGAGGTCGGC
TGCACCGGCA TCCGCGAGAT GCTGCCCGGG ATCGAGGCAC TGGGCTGGCG GCCCGAACTC
TGCATCGTGG GCGAGCCGAC CGGGATGCGA CCGGCCATCG GGCACAAGGG CAAGGCCGCG
CTGGTCGCGA CCTGCCACGG CACGGCCGGG CATTCCTCGC TGGCGCCGCG CCATGTCAAT
GCGCTGCATC TCGCGGCCGA GTTCATCGCC GCCCTGCGCC GCATCCAGGG CGATTACGCC
GCGTCCGCCT GCACCGATCC CGCCTACGAC ATTCCGTTTT CCACCGTCCA TGCCGGCAGG
ATGCAGGGCG GGGCGGCGCT GAACATCGTC CCCGACCGGG CCGCGGTCGA ATTCGAGCTG
CGCCACCTGC CCGGTGATGC GCTGTCGGAT TTCCAGGACC GCCTGCGATG CGAGATCGCC
CGCATCCTCG CGCCGTTTCG TGCGCAGGAC GAGGCGGCGG ACATCCGCAT CGCCCTGACC
AACACCTATC CCGGGCACGA CATCGCCCCG GATCATCCGG CGGTGCAGGA TGTCGTGCGC
CATTGCGGCG ACCCGCGGCG GATCAAGGTC GCCTATGGCA CCGAAGCGGG CTATTTCGCG
CGGCTGGGCA TCCCGACCGT GGTCTGCGGC CCCGGCGACA TGGAGGGGCA GGGGCACAAG
CCGGACGAAT TCCTGGCCCT GCCGCAGCTA GCCCTGTGCG AGCGGATGCT GGACCGGCTG
CTGGCCGGCT TGCGGTGA
 
Protein sequence
MTEPRPETLA LLARLVAFPT VSAESNLALI DFAEHHLRHA GFVTHRLPSR DGTKAGLMAR 
LGEGRGGVML SAHSDVVPAE GQGWSRPPFA LSRRGDRLYG RGTTDMKGFL AAMLSRAARA
GKATPARPLM LAISYDEEVG CTGIREMLPG IEALGWRPEL CIVGEPTGMR PAIGHKGKAA
LVATCHGTAG HSSLAPRHVN ALHLAAEFIA ALRRIQGDYA ASACTDPAYD IPFSTVHAGR
MQGGAALNIV PDRAAVEFEL RHLPGDALSD FQDRLRCEIA RILAPFRAQD EAADIRIALT
NTYPGHDIAP DHPAVQDVVR HCGDPRRIKV AYGTEAGYFA RLGIPTVVCG PGDMEGQGHK
PDEFLALPQL ALCERMLDRL LAGLR