| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3449 |
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| Symbol | |
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| ID | 4582005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 592622 |
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| End bp | 593998 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639770763 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_917216 |
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| Protein GI | 119386161 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.135677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTTCCC CTTCCCGCTT TTTCGGCCCG GCGCTGCTGC TTCTGGCGGC GGGCTGCGCG
GCCGTCGGAC CCGATCCCGA CGCCCGCCCC GCGATCCCCG TGCCCGCGAC ATTTGTCGAG
GGCGAGGCCG CATCGGCCGG CAAGCTGGCC AGCCGCGCCT TCTGGGCAGA ATACCGCGAC
CCGGTGCTGA ACGACCTGAT CGCGCGAGGT CTCAAGCAGA ACCTGGACGA GGCCGCCGCG
CGCGAGCGCA TCCGCGCCGC CGCCGCCGAT CTGCGCGGCA CCGGCGTGCT TGCCGGCCAG
GTCTCGGGCA CGGCCAGCGC CGCGCGCGAA CGGGGCGCCA GCGCGGGCGG GGCGGTCCAG
ACCGCCGGCA ATTCGAGCCT TGGCGCGAAT TTCGTCTTTG ACCTGTTCGG CGGTGCGCGG
CGTGAAAGAC AGGGCGCCGC GGCCAGCCTG GAATCCGCCA AGGCGGGGCT GGGCACGGCG
CGGCTGGCCT GGATCGCCGA GTTGATCGAT GCCTATGGCG ACGCGCGCTA TTACCGGCAG
GCGCTGGCCC TGACCCGCAA GACAGTCTCG ACCCGCGAGG AGACCGTCCG CATCACCCGC
GACCAGCGCG AGTTCGGCGT GGTCAGCGAG TTCGACATGG CCCAGGCCGA GGCATTGCTG
GCCGCCGCCC GGGCCGAGAT ACCGGGCTAT CAGGCCCAGT ATGATGCGCA GGTATTCGCC
ATTGCGACCC TGCTCAATGA ACCCGCATCC TCGGTGCAAG CGCAGATGCG GCGCGGTTCG
GGTCAGCCCC GCATTCCCGG TAGCGCTCGC GCAGGCGTCC CGGCGGACCT GCTGCGCAAC
CGGCCCGACC TGCGCTCGGC CGAATATGAT CTGGCAGCGG CATTGGCGAC GGTGGGGGTG
GCGACGGCCG ACCTGCTGCC CTCGCTTTCG CTCACCGGCT CGGTCAGCGA AAGCGGCGGG
GCGAAGTCCT GGGGCTTCGG GCCGGCGATC TCGTTCCCGG TGCTGAACCA GGGCGCGCTG
CAGGCCACGC GCGCGCGCCG CATCGCCGAG GCGCGCGAGG CCGAGATCGC CTGGCGTGCC
GCCGTCTCGC AGGCGGTCGA GGACGTGCAG GTCGCGCAAT CGAACCTGCG CCGCTATCGC
GAGCAGGCCG CGGCCCTGGA AGGCGCGGCC GCAGCCTATG ACCGCGCCTA TCAGCTGGCC
CGGACGAGCT TTGCCGAGGG TGAGCTGGCG CTGCTGGACC TGCTCGATTC CGACCGCTCG
ACGGCCAGCG CCCGGCTCTC GGCCGCGTCG GCCCGCAATC AGGCGGCCAA GGAATGGGCG
GCGCTGCAGA TCGCGACGGG CGCCGGCGCC GGAGAGGTGG TGCTGGTCAG CCGCTAG
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| Protein sequence | MISPSRFFGP ALLLLAAGCA AVGPDPDARP AIPVPATFVE GEAASAGKLA SRAFWAEYRD
PVLNDLIARG LKQNLDEAAA RERIRAAAAD LRGTGVLAGQ VSGTASAARE RGASAGGAVQ
TAGNSSLGAN FVFDLFGGAR RERQGAAASL ESAKAGLGTA RLAWIAELID AYGDARYYRQ
ALALTRKTVS TREETVRITR DQREFGVVSE FDMAQAEALL AAARAEIPGY QAQYDAQVFA
IATLLNEPAS SVQAQMRRGS GQPRIPGSAR AGVPADLLRN RPDLRSAEYD LAAALATVGV
ATADLLPSLS LTGSVSESGG AKSWGFGPAI SFPVLNQGAL QATRARRIAE AREAEIAWRA
AVSQAVEDVQ VAQSNLRRYR EQAAALEGAA AAYDRAYQLA RTSFAEGELA LLDLLDSDRS
TASARLSAAS ARNQAAKEWA ALQIATGAGA GEVVLVSR
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