| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3444 |
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| Symbol | |
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| ID | 4582000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 584310 |
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| End bp | 586316 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639770758 |
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| Product | ABC transporter related |
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| Protein accession | YP_917211 |
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| Protein GI | 119386156 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.625414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAGA CGGGCGCCCC TCTGATCCGG CTGCGCGGCG TCGGCCGCGA ATACCCCTCG
GGCGAGGGGG TGCTGCGCGT GCTCACGGAC ATCGACCTCG ACATCGGCCA GGGCGAGTTC
GTCGCCGTCA TGGGCGCCTC GGGCTCGGGC AAGTCGACGC TGATGAACAT CCTGGGCTGC
CTCGACCGGC CCAGCTCGGG CAGCTACCGG ATGGACGGGC GCGAGGTGGC GCGGCTGGGC
GCGGGCGAGC TGGCGGCGCT GCGCCGCGAG ACCTTCGGCT TCATCTTCCA GCGCTACCAC
CTGCTCTCCG AGATGACGGC GCTGGGGAAT GTCGAGGTGC CGGCGATCTA TCGCGGCCTG
CCCGCCGATG CCCGCCGCGC CCGCGCCCGC GACCTGCTGG AGCGGCTGGG GCTGGGCGAC
CGGACGGGGC ACCGGCCCGG CCAGCTTTCG GGCGGCCAGC AGCAGCGGGT CTCGATCGCC
CGGGCGCTGG TCAACGACGC CCGCGTGATC CTGGCCGACG AGCCCACCGG CGCGCTCGAC
AGCCGCAGCG GCGACGAGGT GCTGGGCATC CTGGAGCGGC TGAACGCCGA GGGCCGCACC
GTGGTCATCG TCACCCACGA CCCCAGGGTC GCGGCGCGGG CGCATCGCGT GGTCGAGATC
GCCGACGGCC GCATCGTCGC GGACCGCCGG ACCGGGGCGC CGGCCGCCGA TCCCGGGCCC
GGCCCCGCAC AGGCCCCGCA ACCCGCCCCG CAACCGGCCC CCGTTCAGGC CCCCGTTCAG
GCCCGCGTTC AGGCCCGCGC CGCCGTGCCG GTGCTGGGCC GGCTGGCCGA GGCGCTGCGC
ATGGCGCTGC TTTCCATGCG CGCCCACAAG CTGCGCAGCT TCCTGACCAT GCTGGGCATC
ATCATCGGCA TCGCCTCGGT GGTCTCGGTG GTGGCCTTGG GCGAGGGCTC GCGCCGGCAG
GTGCTGCAGA ACATCGCCGG GCTGGGCACC AACACCCTGC AGATCTTTCC GGGCCGCGAT
TTCGGCGACA TGCGCTCGGG GCGGGTGACG ACGCTGGTCA CCGCCGACGC CGCGGCGCTG
GCCCGCCAGC CCCATGTCGC CTCGGTCAGC CCGACGGTCG GCACCAGCGC CACCCTGCGC
CACGGCGCCA CCGAGGCCAG CGCCCAGATC AGCGGCGTCG GCGAGCAGTA TTTCGACGTG
GCCGGCGTCG CGCTGACCCA GGGCCGCGGC TTCGACGAGG CCGACGTGGC GGCGATGGGC
CAGAACGTCG TCATCGACGA GAACACCCGG ACCAGCCTCT TCGGCGACGG CCCGGCGCTG
GGGCAGGTCT TCATGGCCGG CAAGGTGCCC CTGCGGGTGA TCGGCGTGGC CGAGGCGCAG
AACCGCGGCC CCGGCGGCTC GACCAGCCTG ACCGTCTATG CCCCCTATAC CACGGTGCAG
GCGCGCTACC TGGGCTCGAC CAGCGTCAGC GGGCTGACCC TGCGGGTGGC CGACGACGTG
GACATGGCGC TGGCCGAGCA GATGGTCGCC GACATCCTGA CCCGGCGCCA CGGCACCAGG
GACTTCTTCA TCGTCAACAA CGACCAGATC CGCCAGACCA TCACCTCGAC CACGCAGACC
CTGGCGCTGC TGATCGCGGC CATTGCGGTG ATCTCGCTGG TGGTCGGCGG CATCGGGGTG
ATGAACATCA TGCTGGTCTC GGTCACCGAG CGCATCGGCG AGATCGGCCT GCGCATGGCG
GTCGGCGCCC GGCGCGGCGA CATCCGCGCG CAATTCCTGA TCGAGGCGGT GCTGGTCTGC
GTCATCGGCG GCATCGCCGG CATCCTGGCC GCGCTCGGCT TCGGCCTGGC CTTCGAGCGC
ATGAGCAGCG ACTTCACCCT GGTCTATTCC CCCCTCTCCA TGCTCGCCGC CCTCGCCAGC
GCCTGCGCCA TCGGCCTCGC ATTCGGATAC CTCCCGGCCG TCAACGCCGC AAAACTCGAC
CCCGTCAAAG CACTCCAAAA AGGGTGA
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| Protein sequence | MAETGAPLIR LRGVGREYPS GEGVLRVLTD IDLDIGQGEF VAVMGASGSG KSTLMNILGC
LDRPSSGSYR MDGREVARLG AGELAALRRE TFGFIFQRYH LLSEMTALGN VEVPAIYRGL
PADARRARAR DLLERLGLGD RTGHRPGQLS GGQQQRVSIA RALVNDARVI LADEPTGALD
SRSGDEVLGI LERLNAEGRT VVIVTHDPRV AARAHRVVEI ADGRIVADRR TGAPAADPGP
GPAQAPQPAP QPAPVQAPVQ ARVQARAAVP VLGRLAEALR MALLSMRAHK LRSFLTMLGI
IIGIASVVSV VALGEGSRRQ VLQNIAGLGT NTLQIFPGRD FGDMRSGRVT TLVTADAAAL
ARQPHVASVS PTVGTSATLR HGATEASAQI SGVGEQYFDV AGVALTQGRG FDEADVAAMG
QNVVIDENTR TSLFGDGPAL GQVFMAGKVP LRVIGVAEAQ NRGPGGSTSL TVYAPYTTVQ
ARYLGSTSVS GLTLRVADDV DMALAEQMVA DILTRRHGTR DFFIVNNDQI RQTITSTTQT
LALLIAAIAV ISLVVGGIGV MNIMLVSVTE RIGEIGLRMA VGARRGDIRA QFLIEAVLVC
VIGGIAGILA ALGFGLAFER MSSDFTLVYS PLSMLAALAS ACAIGLAFGY LPAVNAAKLD
PVKALQKG
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