Gene Pden_3437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3437 
Symbol 
ID4581993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp579311 
End bp579997 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID639770751 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_917204 
Protein GI119386149 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.518688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATG TTCTTCCCTT GCCCGCCATC CCCTCGGTTC CCGTCGCCGG CAGCGACGAC 
CGCTTTCCGG TGCGCCGGAT CTTTTGCGTC GGGCGCAACT ATGCCGATCA TGCCCGCGAA
ATGGGCCACG ACCCGGATCG CGAACCGCCG TTCTTCTTTT CGAAGCCTGC GGACGCGCTG
CTGACGGACG ATGCGCCCTT GCCCTATCCG CCCAGGACCG CAGACCTGCA TTACGAAGGC
GAGTTGGTGG TGGCGATCGG CAAGGCAGGC CGCGACATTC CCATGACCGA GGCGGCACGG
CATGTCTGGG GCTATGCGGC CGGCAACGAT TTCACCCGCC GCGATCTTCA GGCCGAGGCG
AAGAAACTGG GCCGGCCCTG GGACATGGCC AAGGGCTTTG ACCATTCGGC GGCCTGCGGG
GCGATCACGC CCGCGGCGCA AGCGGGACCG ATGGATCGCG GCCGGATCAT GTCGACGGTG
GACGGTGTCG TCCGGCAGGA CGGCGACCTG GGGCAGATGA TCTGGTCGAT CCCCGAGATC
GTGGCGATCC TGTCGGGCTA TGTCGGCCTG GCGGCGGGCG ACCTGATCTT TACGGGCACT
CCGGCGGGCG TCGGCGCGCT GTCCCGCGGT GCACGGGTGG CCGTGCGGAT CGACGGCCTG
GCGCCGCTGG TGACGGACAT CGTCTAG
 
Protein sequence
MTHVLPLPAI PSVPVAGSDD RFPVRRIFCV GRNYADHARE MGHDPDREPP FFFSKPADAL 
LTDDAPLPYP PRTADLHYEG ELVVAIGKAG RDIPMTEAAR HVWGYAAGND FTRRDLQAEA
KKLGRPWDMA KGFDHSAACG AITPAAQAGP MDRGRIMSTV DGVVRQDGDL GQMIWSIPEI
VAILSGYVGL AAGDLIFTGT PAGVGALSRG ARVAVRIDGL APLVTDIV