| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3433 |
|---|
| Symbol | |
|---|
| ID | 4581989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 575239 |
|---|
| End bp | 576189 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639770747 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_917200 |
|---|
| Protein GI | 119386145 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.061949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGCC TGATCGTCCA ACCCATCCAC GAATCGGGCC TGGCCCTGCT GCGCGAGAAC
GGCATCGAGC CGGTGCCCTG TCCCGCGCCG GACATGGCGA CGGTGGCGCA CCACATCGCC
GGCTGCCAGG CCGTCATCAC CCGCGACGCC GGCCTGTCCG CCCCGGCCTT TGCCGCGGCC
GGCGAGCTGC GCGTGGTGGT CGTCCACGGC ACCGGCCATG ATCCGGTGGA CAAGGGCGCC
GCCACGGCGC GCGGGGTCGT GATCGCCAAT ACGCCGGGCG CCAACGCGCA ATCGGTGGCC
GAGCTGGCGC TGGGCCTGGC GCTGGCCGTG GCGCGGCGCA TCCCGGCGGC GGATCGCGCG
CAGCGGGCGG GCGTCGCCGG ATTTCGCGAA TCCGCCCGCT TCGCCGAGCT GTCGGGCAAG
ACCGCGCTGA TCGTCGGCTG GGGTGCCATC GGGCGCAGCT TCGGCCGCAT GCTGGACCGG
GCGCTGGGTA TGACGGTGCT GGTCCATTCG CCGCGCGCCT CGGATACGGC GCCCTATCGC
CGCGCCGCCG ATCTTGCCGA GGGGCTGGCG CAGGCCGATC TGGTCTCGCT GCACACGCCG
CTGCGGGCCG AGACGCGGGG CATGATGGGC CTCGCGCAGT TCCGGGCCAT GAAGCCGGGG
GCGATCCTGC TGAACCTCGC CCGTGCGGGG CTGGTCGACG AGCCGGCGCT TTGCGAGGCG
CTGGCCTCGG GGCGGCTGGC GGGGGCCGGG CTCGACGTCT GGTCCGGTGA TGCGCCGCAG
GGGCCGCTGG CGGCCTTCCC CAATGTCGTC TTTACCCCGC ATCTGGGCGG CACGACCGAG
GACGCGCTGA AGCGCGTGGC CGAGGCCGCC GCCCGCCATG TCATTTCCGC GCTTTCCGGC
AGGCTGCCCG AAACCGCGAT CAATCCCGAA GTCTGGAGCC AGACCGCATG A
|
|---|
| Protein sequence | MKCLIVQPIH ESGLALLREN GIEPVPCPAP DMATVAHHIA GCQAVITRDA GLSAPAFAAA
GELRVVVVHG TGHDPVDKGA ATARGVVIAN TPGANAQSVA ELALGLALAV ARRIPAADRA
QRAGVAGFRE SARFAELSGK TALIVGWGAI GRSFGRMLDR ALGMTVLVHS PRASDTAPYR
RAADLAEGLA QADLVSLHTP LRAETRGMMG LAQFRAMKPG AILLNLARAG LVDEPALCEA
LASGRLAGAG LDVWSGDAPQ GPLAAFPNVV FTPHLGGTTE DALKRVAEAA ARHVISALSG
RLPETAINPE VWSQTA
|
|---|
| |