Gene Pden_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3430 
Symbol 
ID4581986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp572761 
End bp573534 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID639770744 
Productallophanate hydrolase subunit 1 
Protein accessionYP_917197 
Protein GI119386142 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.381456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGG CCCGCACGGG GCCGCGGCGC ACGTCACCAG AACAAGAAGA AATGATGCAA 
CCCAAGATCC TACCCTGCGG CGATACCGCG CTTTCGCTGC AATTCGGCGA AACCATCGAT
GCTAAGGCCA ATGCGCGGGT GATCGCCACC GCCGCGCGTC TGGAGGGCAT GGCGGTGCCG
GGCCTTGTCG ATATCGTGCC GACCTATCGC TCGCTCCTGC TGCGCTACGA TCCCGAAATC
GTCAGCGGCG CCCGCCTCGA AACCATCCTG GCCGGACTGG CGCCGGATGA TTGCGCAAGC
GAGGCGCCGT CGCGGCTATG GGTCGTGCCC TGCCTCTATG GCGGAGAGGT CGGCCAGGAT
CTTGACGAAC TGGCCCGGAT GAAGGGGATG CCGCCCGACG AGATCGTCGC GCTGCACTCG
GCGGCGGAAT ACCGCATCTA CATGATCGGC TTCGCGCCGG GCTTCGCCTA TCTGGGCGGC
CTGCCCGAGA TCCTGCACAC GCCGCGCCTG CCCAGGCCGC GCCAGAACAT CCCGGCGGGC
GCGATCGGCA TCGGCGGGCA GCAGGGCAAT ATCAACTCGG TTGCGGGGCC TTCGGGCTGG
CGCTTCATCG GCTGGACGCC GCTGCGATCA TTCGATCCGT CGCGGACCGA GCCCTTCCTG
TTCCGGGCTG GCGACCGCAT CCGGTTTCGT CCCATCGATG CTGCCGAGGC CCAGGTCCTG
GCCGGCCGCG TCGCGGCAGG AGAGGCGATT CTCCAACCCG AGGCCATGGC ATGA
 
Protein sequence
MPAARTGPRR TSPEQEEMMQ PKILPCGDTA LSLQFGETID AKANARVIAT AARLEGMAVP 
GLVDIVPTYR SLLLRYDPEI VSGARLETIL AGLAPDDCAS EAPSRLWVVP CLYGGEVGQD
LDELARMKGM PPDEIVALHS AAEYRIYMIG FAPGFAYLGG LPEILHTPRL PRPRQNIPAG
AIGIGGQQGN INSVAGPSGW RFIGWTPLRS FDPSRTEPFL FRAGDRIRFR PIDAAEAQVL
AGRVAAGEAI LQPEAMA