| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3429 |
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| Symbol | |
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| ID | 4581985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 571452 |
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| End bp | 572753 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639770743 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_917196 |
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| Protein GI | 119386141 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.276391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA TCGTCTTTAC CCTGCTTTTC CTGATGGCCG TCCTGCTGGG GTCGGGCATG
TGGATCGGCA TCGGCCTGAT CGGCACCGGC ATCGGCCTGG TCGAGATATT CAAGCCCAAC
CTTCCGGCGC TGAAACTGCT GTCGCAGCAA AGCTGGAACA CCGTGGTCTC GCCCGAGTTG
CTGGCGCTGC CGCTGTTCAT CCTGATGGCC GAGATCCTGT TTCGCACCCG CATCTCCGAG
GCGCTGTTCA GCGGGCTGTC GCCCTGGCTG CGCCGGGTGC CGGGCCGGTT GAGCCATCTG
ACGGTGCTGG GCTGCACGCT GTTCGCCTCG GTCTGCGGCT CGTCGGCGGC GACCACGGCC
ACGGTCGGGC GCATCACCGC AAAGGAGCTG ATCGACCGCG GCTACAACCG CGATCTGGTC
ACCGGCAGCC TTGCCGGGGC GGGCACGCTG GGCTTTCTGA TCCCGCCCTC GACCATCATG
ATCATCTATG GCGTGATGGC CGAGGAATCG ATCCTGAAGC TGTTCATCGC GGGCATCCTG
CCCGGCTTCA TGCTGGCTGC GGCCTATATG GGCTATCTGG CGATCCGCTC GATGATGAAC
CCGTCGCTGG TGGGTGCCCC GCCGCCGCCC AGTTCGCTTT GGGACAAGAT CGTGGCGCTG
AAGGACCTGG GTCCGCTGCT GCTCCTGATC CTGGGTGTCA TCGGCTCGAT GTATGGCGGC
ATTGCCACGC CGACCGAGGC GGCCGCCGTG GGCGTCGCCG CCTCGATGCT GATCGGCTTC
CTGCAGCGGA CGCTGGACCT GAAGGGCGTG CTGATCGCCG CCCGGCATGC CGCCGAAAGT
TGCGCGATGA TCGGGCTGAT CATGATCGGC GCCATGTTCC TGTCCACCGC CATCGGCTAT
CTGGGCGTGC CGCGCTATAT CGCCTCGGAA ATCCAGGGCT GGGGCATGTC GCCCTTCATG
CTGATCGTCG TGCTGCTGAT CTTCTACGTC ATCCTCGGCA CGGTGATGGA GGGGCTGGGC
ATCATCGTCA TGACCCTGCC GATCACCCTG CCTCTGGTCC TGGCGGCCGG CTACGACAAG
GTCTGGTTCG GGATCTTCCT GGTGATCGTG GTCGAGATGG CGCAGATCAC CCCGCCGGTG
GGCTTCAACC TGACGGTGAT CCAGCGTCTG ACGGGCGACA GCATGGGGCG CATCACCCGC
GCCACGATGC CGTTCTTCTA CATCATGTCG GCATTCGTGC TGCTGATCGC GGTCTTTCCG
GGGATCATCG ACCTGCTGCC CGGCATGATG GCGGGACGAT AG
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| Protein sequence | MATIVFTLLF LMAVLLGSGM WIGIGLIGTG IGLVEIFKPN LPALKLLSQQ SWNTVVSPEL
LALPLFILMA EILFRTRISE ALFSGLSPWL RRVPGRLSHL TVLGCTLFAS VCGSSAATTA
TVGRITAKEL IDRGYNRDLV TGSLAGAGTL GFLIPPSTIM IIYGVMAEES ILKLFIAGIL
PGFMLAAAYM GYLAIRSMMN PSLVGAPPPP SSLWDKIVAL KDLGPLLLLI LGVIGSMYGG
IATPTEAAAV GVAASMLIGF LQRTLDLKGV LIAARHAAES CAMIGLIMIG AMFLSTAIGY
LGVPRYIASE IQGWGMSPFM LIVVLLIFYV ILGTVMEGLG IIVMTLPITL PLVLAAGYDK
VWFGIFLVIV VEMAQITPPV GFNLTVIQRL TGDSMGRITR ATMPFFYIMS AFVLLIAVFP
GIIDLLPGMM AGR
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