Gene Pden_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3421 
Symbol 
ID4581977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp564392 
End bp564814 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content72% 
IMG OID639770735 
Productendoribonuclease L-PSP 
Protein accessionYP_917188 
Protein GI119386133 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC ATCCCCAGCC GGTGCCGCAG GGCGATTACG TCCCGGCCCG CCGCCACGGC 
ACGCTGATCT TCACCTCGGG CATGACCCCG CGCCGCGATG GCGTGCTGCT GCATCACGGT
CCGGTCCGGG CCGACGCGCC CGTCGATGAT TATCGCGATG CGGTGCGACT GGCCTGCGGC
AATGCGCTGG CGGCGGCGCA CGGGATGCTG GCTCCGGGCG AAAGCCTTGC CGCGATCCTG
AGCCTGACGG TCTATGTCGC CGCCGAGCCG GGATTTGCCG CCCATTCCCG CATCGCCGAC
CTCGCCTCGG CCTATCTGCG CGAGGAATTG GGCGATGCCG GCATCGGCAG CCGCGCCGCC
GTGGGCGTGG CGTCCCTGCC GGGGAACGCG CCCGTCGAGA TCCAGCTTGT CGCGGCCACC
TGA
 
Protein sequence
MSAHPQPVPQ GDYVPARRHG TLIFTSGMTP RRDGVLLHHG PVRADAPVDD YRDAVRLACG 
NALAAAHGML APGESLAAIL SLTVYVAAEP GFAAHSRIAD LASAYLREEL GDAGIGSRAA
VGVASLPGNA PVEIQLVAAT