Gene Pden_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3416 
Symbol 
ID4581972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp560290 
End bp561237 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content68% 
IMG OID639770730 
Productacetamidase/formamidase 
Protein accessionYP_917183 
Protein GI119386128 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCACC ATCTTGCCGC CACGCCCGAA ACGGTGCTCT GGGGCCATAT CGACCCGGCG 
GCAGCGCCGG TCCTGCACAT CGCCAGCGGC GACAGCGTCA CCATCGAGAC GCTGTCCGGC
GGGCCGCGCA ACCTGCCCGC GCCAGAGACA GGCTGCCACG CCCTGGCCGC GCATCGCGAC
GTCATCGCCC GGTGCCGACC CCACCTTGGG CCGCACATGC TGACCGGCCC GATCTTCATC
AGGGATGCCG CACCGGGAGA CCGGCTGCTG GTCGAGATCG AGACAATCGA GCTTGCGCAG
GATTTCGGCT GGAACGCCAT AGAGCCGGGC GCCGGCATCC TGCCGGACCT GGCGGACGAA
TACGAATCCC TGACCGTCCC GCTGGACCGC AGCAGACGGC AGGCGCGGCT GCCCTGGGGG
CCGGTGGTCG ACCTGGCGCC GTTCTTCGGC ATTCTCGCGG TTGCGCCCGA TGCCTCGGGC
GGCTGCGTGA CCTCGGTCGT GCCCGGCCCC TTTGGCGGCA ACATGGACAA TCGCTATTGC
CGTGCGGGCG CGCGGATAGC CCTGCCCGTC TTTTGCGAAG GGGCGCTGTT TCTTGCCGGC
GACGGGCATG CGCTGCAAGG AGACGGCGAA ATCTGCGATA CGGCACTGGA GACCGCGCTC
AATGGCCGGC TCCGCTTTCA CCTGGAAAAA GGCACCGCCC CCGAGGCGCC CGAAATCCTC
TGCGACAATC GGATCATCAC CATGGATTTC GACGAGGACC TGGACAAGGC GGCCACGACC
GCGGCGCGCC GGATGGTCCA CTGGCTGACG CGCAACACGC CGCTTTCGGC CGGGGAAGCC
TATCGCCATT GCAGCCTGCT GGCCGATCTG CGCGTGACCC AGATGGTCAA CCGTCGCAAG
GGCGCGCATT GTGTCCTGGA CCTCGGCAGC CTATCCCCTG CCGCATAG
 
Protein sequence
MHHHLAATPE TVLWGHIDPA AAPVLHIASG DSVTIETLSG GPRNLPAPET GCHALAAHRD 
VIARCRPHLG PHMLTGPIFI RDAAPGDRLL VEIETIELAQ DFGWNAIEPG AGILPDLADE
YESLTVPLDR SRRQARLPWG PVVDLAPFFG ILAVAPDASG GCVTSVVPGP FGGNMDNRYC
RAGARIALPV FCEGALFLAG DGHALQGDGE ICDTALETAL NGRLRFHLEK GTAPEAPEIL
CDNRIITMDF DEDLDKAATT AARRMVHWLT RNTPLSAGEA YRHCSLLADL RVTQMVNRRK
GAHCVLDLGS LSPAA