Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3415 |
Symbol | |
ID | 4581971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 559011 |
End bp | 560171 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639770729 |
Product | LysR family transcriptional regulator |
Protein accession | YP_917182 |
Protein GI | 119386127 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCGCC AGGTTGCACT CTCGGAATCG AGCGCGCTGC TCTCAGGGGC CCTGCCCAAG CCGCCGGAAT GCAGAACGGC CGGAGGCGCC TCCGGTCGTT GCGATTTCAA GCCTCTTCCT CCTGGAAGGC CTCTTTGCGC TTCTTGCGGA AGCGAACACG GTTTCATCGA TGCGCCCCAT GCGTGCCAGA ATGCCGACCG GATCGGCCAT GCGCACGACC TCGATCAGAC CATCGCCGCT GACATAGGGC GGAACGTAGA CCGGAACATA ACCCGCTCGC GCCAGCTAAA GACGCTTCTC GCCATTGTGG AAACCGGCAG CTTCGCCCGT GCCGCGAACC GCGTTGCGCT GACGCCCTCG GCGGTCAGCC AGCAGATCCA GGCCCTTGAA AACGAAGTCG GAGTTTCGCT TTTCAACCGC GAGAACCGCC CGCCGACGCT GACCGCGGCG GGGCAGCAGA TGGTCGAGGC GGCGGCAGAG CTCGTCAGGG CGGCAGAAAA CGCCATCGAC GCGATTTCAG GCCGCCGGAT CGTGGGAAAG TTTGTCATCG GCTCGGTCCG CACCAGCGCG ATAGGGCTGC TGCCGCAAGC GGTATCGCGC GTCGTGGCGA ATCATCCGGG GCTGAAGATC CGGCTTCTGG TCGGGAACTC GGAAAATCTG GTCCAGGATG TCTATGCCGG CAGGCTGGAC GCCGCGATCA TCGCCGAGAA CAGCCTGTCG TCGCGCGATC TCGACTGGTC GCCCTTTATC CGCGAGCCGC TGTTTCTGAT CGCGCCCCCG GGAACCCCGG TCGTGGATGT CCGGCAGGCG TTGTCGGCGT TTCCCTTCGT GCGGTTCCGC AGCAACGTGC CCTTGGCGCG GCTGATCGAA ACCGAGCTGG GCCGGATGAA CCTGCCGCTG AACGACATCG CCGAGATGGA CACGATTTCG GCGGTGACCG CCTGTGTCGA AAACGGGCTG GGGGTGTCGA TCGTGCCGCG GATCGCCGCG ATCGAGCGCG GGGTGGACCT GGTCATGTTG CCTTTCGGAG ATCCGCCGGT CTTTCGCCAG ATCGGGCTGC TGCAACGCCC GAAAGGGCCT CGTGCCGGGC TGATCGCCGA ATTGCATGAG CAACTGGCCC AGGTCAGCGG CGAATATGGG GTGCCCAGGC CCTTGTCGTG A
|
Protein sequence | MQRQVALSES SALLSGALPK PPECRTAGGA SGRCDFKPLP PGRPLCASCG SEHGFIDAPH ACQNADRIGH AHDLDQTIAA DIGRNVDRNI TRSRQLKTLL AIVETGSFAR AANRVALTPS AVSQQIQALE NEVGVSLFNR ENRPPTLTAA GQQMVEAAAE LVRAAENAID AISGRRIVGK FVIGSVRTSA IGLLPQAVSR VVANHPGLKI RLLVGNSENL VQDVYAGRLD AAIIAENSLS SRDLDWSPFI REPLFLIAPP GTPVVDVRQA LSAFPFVRFR SNVPLARLIE TELGRMNLPL NDIAEMDTIS AVTACVENGL GVSIVPRIAA IERGVDLVML PFGDPPVFRQ IGLLQRPKGP RAGLIAELHE QLAQVSGEYG VPRPLS
|
| |