Gene Pden_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3415 
Symbol 
ID4581971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp559011 
End bp560171 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content65% 
IMG OID639770729 
ProductLysR family transcriptional regulator 
Protein accessionYP_917182 
Protein GI119386127 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCC AGGTTGCACT CTCGGAATCG AGCGCGCTGC TCTCAGGGGC CCTGCCCAAG 
CCGCCGGAAT GCAGAACGGC CGGAGGCGCC TCCGGTCGTT GCGATTTCAA GCCTCTTCCT
CCTGGAAGGC CTCTTTGCGC TTCTTGCGGA AGCGAACACG GTTTCATCGA TGCGCCCCAT
GCGTGCCAGA ATGCCGACCG GATCGGCCAT GCGCACGACC TCGATCAGAC CATCGCCGCT
GACATAGGGC GGAACGTAGA CCGGAACATA ACCCGCTCGC GCCAGCTAAA GACGCTTCTC
GCCATTGTGG AAACCGGCAG CTTCGCCCGT GCCGCGAACC GCGTTGCGCT GACGCCCTCG
GCGGTCAGCC AGCAGATCCA GGCCCTTGAA AACGAAGTCG GAGTTTCGCT TTTCAACCGC
GAGAACCGCC CGCCGACGCT GACCGCGGCG GGGCAGCAGA TGGTCGAGGC GGCGGCAGAG
CTCGTCAGGG CGGCAGAAAA CGCCATCGAC GCGATTTCAG GCCGCCGGAT CGTGGGAAAG
TTTGTCATCG GCTCGGTCCG CACCAGCGCG ATAGGGCTGC TGCCGCAAGC GGTATCGCGC
GTCGTGGCGA ATCATCCGGG GCTGAAGATC CGGCTTCTGG TCGGGAACTC GGAAAATCTG
GTCCAGGATG TCTATGCCGG CAGGCTGGAC GCCGCGATCA TCGCCGAGAA CAGCCTGTCG
TCGCGCGATC TCGACTGGTC GCCCTTTATC CGCGAGCCGC TGTTTCTGAT CGCGCCCCCG
GGAACCCCGG TCGTGGATGT CCGGCAGGCG TTGTCGGCGT TTCCCTTCGT GCGGTTCCGC
AGCAACGTGC CCTTGGCGCG GCTGATCGAA ACCGAGCTGG GCCGGATGAA CCTGCCGCTG
AACGACATCG CCGAGATGGA CACGATTTCG GCGGTGACCG CCTGTGTCGA AAACGGGCTG
GGGGTGTCGA TCGTGCCGCG GATCGCCGCG ATCGAGCGCG GGGTGGACCT GGTCATGTTG
CCTTTCGGAG ATCCGCCGGT CTTTCGCCAG ATCGGGCTGC TGCAACGCCC GAAAGGGCCT
CGTGCCGGGC TGATCGCCGA ATTGCATGAG CAACTGGCCC AGGTCAGCGG CGAATATGGG
GTGCCCAGGC CCTTGTCGTG A
 
Protein sequence
MQRQVALSES SALLSGALPK PPECRTAGGA SGRCDFKPLP PGRPLCASCG SEHGFIDAPH 
ACQNADRIGH AHDLDQTIAA DIGRNVDRNI TRSRQLKTLL AIVETGSFAR AANRVALTPS
AVSQQIQALE NEVGVSLFNR ENRPPTLTAA GQQMVEAAAE LVRAAENAID AISGRRIVGK
FVIGSVRTSA IGLLPQAVSR VVANHPGLKI RLLVGNSENL VQDVYAGRLD AAIIAENSLS
SRDLDWSPFI REPLFLIAPP GTPVVDVRQA LSAFPFVRFR SNVPLARLIE TELGRMNLPL
NDIAEMDTIS AVTACVENGL GVSIVPRIAA IERGVDLVML PFGDPPVFRQ IGLLQRPKGP
RAGLIAELHE QLAQVSGEYG VPRPLS