Gene Pden_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3414 
Symbol 
ID4581970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp558039 
End bp558896 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content70% 
IMG OID639770728 
Producthypothetical protein 
Protein accessionYP_917181 
Protein GI119386126 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGAG AAACGATTGG AAACCCGCTG AGCTGGAGCG CGCAGAAGCT CGCTGGCATC 
GGCCGCAGCG CCGGGGCGGC GGTGGACGGG ATCGGCAGTC ACGAGATGAC CCTGCCCGAG
GTCAACCGGA TCGGCCTGGG CGATATTCGC GCGGCGCTTC GCAAGGGCGT CAAGGATTTC
GCCGCGCTGC GCACCGACGT GATCACGGCG GTGGCGCTTT ATCCGGTGAT CGGCTTCGTC
CTCGCCGCCT GGGCGTTCAA CGCCGGGCAG GTGCATCTGC TTTTCCCGCT GGCCGCGGGC
TTTCCCCTGA TCGGGCCGGT CGCGGCGATC GGCCTCTACG AGATGAGCCG GCGCCGCGAA
CGGGGCGAAG AGACGGATTG GAGCGCCGTG CTGGCCACCC TGACCGGCCG GGTGCTGGGA
CCGGTGCTGA TGCTGGGCTG CCTGCTCGCG GTGATCTTCG CCTTCTGGCT CCTGGCCGCG
CATGCGATCT GGGTCGTCAC CCTGGGGCCC GGGCCCTATG ACAGCCTGTC CGTCCTTCTG
CGCGATGCCC TTACCACCAG CGCGGGCTGG ACGATGGTCC TCGCCGGGTT CGGCGTCGGC
TTCGTCTTCG CGGCCGTGGT GCTCTGCGTC AGCCTGGTGT CGTTCCCGAT GCTGATCGAC
CGCCCGGTGG GCGTGCCGGT GGCGCTGGCG ACCTCGCTTG CCGTCGCGCG CCGCAACCCG
GGCACGACGG CGCTGTGGGG GGTGATCGTC ACCGTCTCGC TGGTGCTGGG GATGATCCCG
CTCTTCGCCG GGCTGATCGT CGTGCTGCCC ATCCTCGGCC ACGCGACATG GCACCTTTAC
CGGCGGGCGG TGGCCTAG
 
Protein sequence
MHRETIGNPL SWSAQKLAGI GRSAGAAVDG IGSHEMTLPE VNRIGLGDIR AALRKGVKDF 
AALRTDVITA VALYPVIGFV LAAWAFNAGQ VHLLFPLAAG FPLIGPVAAI GLYEMSRRRE
RGEETDWSAV LATLTGRVLG PVLMLGCLLA VIFAFWLLAA HAIWVVTLGP GPYDSLSVLL
RDALTTSAGW TMVLAGFGVG FVFAAVVLCV SLVSFPMLID RPVGVPVALA TSLAVARRNP
GTTALWGVIV TVSLVLGMIP LFAGLIVVLP ILGHATWHLY RRAVA