Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3407 |
Symbol | |
ID | 4581963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 551486 |
End bp | 552592 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639770721 |
Product | ABC transporter related |
Protein accession | YP_917174 |
Protein GI | 119386119 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.938763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCC TCGAAATCGA CCATCTGCAG AAAGCCTATG GCGACACGCA TATCCTGCAT GACATCAACA TCAGCATAGA GCCGGGCGAT TTCCTGGTCC TTGTCGGTCC CTCGGGCTGC GGCAAGTCCA CCTTGCTCAA CTGCATCGCC GGGCTGGAGC CGATTACCGG CGGCACCATC CGCATCGGCG GGCGCGACGT GACCGGCGTG TCGCCCAAGG ACCGGGACAT CGCCATGGTG TTCCAGTCCT ATGCGCTTTA CCCGACGATG AGCGTCGCCA GGAACATCAC CTTCGGGATG CAGGTGCGCG GCGTGGACAA GGCCACGCAG GCCGCGAAAC TGGCCGAGGT CGCCCGGCAA CTGCAGATCG AGCCGCTCTT GGCCCGCAAG CCCGGCCAGT TGTCGGGAGG GCAGCGCCAG CGGGTGGCGA TGGGCCGGGC GCTGGTGCGC GATCCCAAGC TGTTCCTGTT CGACGAGCCG CTGTCCAATC TGGACGCCAA GCTGCGCGTG TCCATGCGGA CCGAGATCAA GAAGCTGCAC CAGGATCTGA ACGCCTCGAT CGTCTATGTC ACCCATGACC AGATCGAAGC AATGACGCTG GCCACCAAGA TCGTCGTGAT GAAGGGCGGC GTGATCCAGC AGATCGGCGC TCCGGCGGAA ATCTACAACC GCCCGGCCAA CATGTTCGTG GCCGATTTCA TGGGCAGCCC GGCGATGAAC CTGATCCCGG CGCAGGTGCG CTCCGAAGGC GGCCAGACCC GCATCGAGAT TGCGCGCGAG GGTGCGGCGC CGCTGGTCAT CACCGACCCG GTGGCGCGCC AGCTTCCGGC CGAGATCGTC CTGGGCGTCC GTCCCGAGGA TATCCACGAA GCGACCGGCA GCGCCCATCT GCCGGGGCTG GCGCAGGGCG CGGGCGGCGA GGTGATGATC GAGATCGTCG AGCCTGCGGG CGCGGATACC TTTGCCGTCA CCCATCTGGG CGGCAAGCCG GTCACGGCGC GGCTGCGCGC GGAAAGCGCG GTTCGGGCGC GGGCGATGTT TCCGCTCGCC TTCGACCTCT CGAAAGTGTC CTACTTCTCG CCCGAGAACG GAGAGCGGTT GAACTAG
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Protein sequence | MPILEIDHLQ KAYGDTHILH DINISIEPGD FLVLVGPSGC GKSTLLNCIA GLEPITGGTI RIGGRDVTGV SPKDRDIAMV FQSYALYPTM SVARNITFGM QVRGVDKATQ AAKLAEVARQ LQIEPLLARK PGQLSGGQRQ RVAMGRALVR DPKLFLFDEP LSNLDAKLRV SMRTEIKKLH QDLNASIVYV THDQIEAMTL ATKIVVMKGG VIQQIGAPAE IYNRPANMFV ADFMGSPAMN LIPAQVRSEG GQTRIEIARE GAAPLVITDP VARQLPAEIV LGVRPEDIHE ATGSAHLPGL AQGAGGEVMI EIVEPAGADT FAVTHLGGKP VTARLRAESA VRARAMFPLA FDLSKVSYFS PENGERLN
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