| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3404 |
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| Symbol | |
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| ID | 4581960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 548443 |
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| End bp | 549684 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639770718 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_917171 |
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| Protein GI | 119386116 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA AACCCCTTCT GGCGGCGTCG ACCGCCGTGA TGCTGGCCGG GCCGGTGCTG
GCCGAGCCGC AGGCCGAAGT GCTGCACTGG TGGACCTCGG GCGGCGAGGC GCGCTCCGTC
GCGGTGCTGC AAGAGCAGTT CGCAGCCGAG GGCGGCAGCT GGACCGACAT GCCCGTGGCG
GGCGGGGGCG GCGACGCAGC AATGACCGCG CTGCGCGCCC GCGTGCTGTC GGGCAATGCG
CCGACCGCCG TGCAGTTGAA AGGCCCGGCC ATTCAGGAAT GGTACGAGGA AACCGGGCTG
GCCGATATCG GTCCCGTGGC CGAGGAAAAC GGCTGGGAAG CCGTCCTGCC CGTCCGCATC
GCCGAGCACA TGCAATGCGA AGGCCAATGG TGCGCCGCGC CGGTGAACGT CCATCGCGTG
AACTGGATCT GGGGCAACAA GCAGATCCTG GACGAGCATG GCATAGCGAT GCCGACCACA
TGGGAGGAGT TCAACGCCGC TGCCGAGACG CTGAAGGCGG CGGGCGTGAC GCCTCTGGCC
CATGGCGGGC AAAGCTGGCA GGACGCGACC GTGTTCGAGA CCGTCGTCCT GGGCCTGGGC
GGGCCGGAAT TCTACCAGCA GGCGCTGGTC GACCTGGACC CTCAGGCGCT GAACTCGGAT
ACCATGCGCC AGGTGTTCGA CCAGATGCGG GTGATCCGCG GCTATGTGGA CGACAATTTC
TCGGGGCGCG ACTGGAACCT CGCGACCGCG ATGGTGATGA ACGGCGAGGC CGCCTTCCAG
ATCATGGGCG ACTGGGCCAA GGGCGAGTTT CTGGCCGCCG ACAAGAAGCC GGGCGTGGAT
TTCGTCTGTG CCGAGACGCC CGGCGGCGGG TTCCTCTACA ACGTCGACAG CTTCGCCTTC
TTCAAGGTCG ATGGCGATGA CCGCCAGCAG GGGCAGGCGC TGCTGGCCCG CCTGATCATG
GGCGAGGGCT TCCAGAAGAC CTTCAACCTC AACAAGGGCT CGATCCCCGC GCGCACCGAC
GTGGCACTGG ACGAGTTCGA CGATTGCGCC CGGCAATCGG CCGAGGCGAT GAATGCGGGT
GCGGAAAACG GTTCCCTGCT GCCCTCCTAT GCGCATGGCA TGGCGCTGCG CGGCGCGCCC
GCCGGGGCGA TCACCGATGT GGTGACGGCG CATTTCAACA GCGACATGAC CTCGGACGAG
GCCGTGGAGC AACTGGCCAA CGCCGTCGCG AGCGCGATGT AA
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| Protein sequence | MTMKPLLAAS TAVMLAGPVL AEPQAEVLHW WTSGGEARSV AVLQEQFAAE GGSWTDMPVA
GGGGDAAMTA LRARVLSGNA PTAVQLKGPA IQEWYEETGL ADIGPVAEEN GWEAVLPVRI
AEHMQCEGQW CAAPVNVHRV NWIWGNKQIL DEHGIAMPTT WEEFNAAAET LKAAGVTPLA
HGGQSWQDAT VFETVVLGLG GPEFYQQALV DLDPQALNSD TMRQVFDQMR VIRGYVDDNF
SGRDWNLATA MVMNGEAAFQ IMGDWAKGEF LAADKKPGVD FVCAETPGGG FLYNVDSFAF
FKVDGDDRQQ GQALLARLIM GEGFQKTFNL NKGSIPARTD VALDEFDDCA RQSAEAMNAG
AENGSLLPSY AHGMALRGAP AGAITDVVTA HFNSDMTSDE AVEQLANAVA SAM
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