Gene Pden_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3398 
Symbol 
ID4581954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp543498 
End bp543977 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID639770712 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_917165 
Protein GI119386110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG TCCTGACCAA CCGTCGTACT CTTCTGATCG CCGCCAGTGT CGCCGTGGTG 
CCCGGCCTGT TCGTGCCCGC CCGCGCGCAA GGGCTCGCCC CGACGCCCTC GATGCGCGGC
GGTGCCAACA ACTACCTGCC GGGCGCGCCG ATCGTGGACC GGATCGGCGG CGGCGGGTTC
TGGATGACGG GCTCGGTCCG TCGTGTCGGC GATGGTGTCC CGCTGGCGGG TCAGCGCATC
CAGATTTGGG CGCATACCAC CGAGGGACAT GAGCGCGATC CGCATAGCCA CGGCGCCACG
CTTACCGATG CGAATGGAGT GTTCCGGCTC GAAATGCCCC AGATCGTCCC CGCTTTCGGC
CAGCCTCACG GCCACCTAGC CTATGACAGT GGCGACTTTG AAACCGTCTT TCTCCGTCCG
GTCATGCGAA GCGCCCGCGA TACCAGCCTC CACGCGGATT TCGTGCTCGT GCCGGTCTGA
 
Protein sequence
MTDVLTNRRT LLIAASVAVV PGLFVPARAQ GLAPTPSMRG GANNYLPGAP IVDRIGGGGF 
WMTGSVRRVG DGVPLAGQRI QIWAHTTEGH ERDPHSHGAT LTDANGVFRL EMPQIVPAFG
QPHGHLAYDS GDFETVFLRP VMRSARDTSL HADFVLVPV