Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3389 |
Symbol | |
ID | 4581946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 534444 |
End bp | 535115 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639770705 |
Product | GntR family transcriptional regulator |
Protein accession | YP_917158 |
Protein GI | 119386103 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATATCG AAAAACAGTG GCCGCGCGGA CAACGCGCCG CCTTTGTCGC AAATTTCATT CGCGATCAAA TCGTCTCGGG CGAGCTTGCC GCCAGCACCA GGATCAATGA ACGTGTGCTT ACGGAACAAC TGGGCGTGTC GCGCACGCCA CTGCGTGAAG CCTTTAAGAT TCTGGAAAGC GAAGGTCTGC TGACTATCGA GCCGAACCGC GGCGCAATGG TGACGGCGAT CTCGCCGCAA GAGGTGGAAC TGGCGATCGA GGTGCTGATC GCGCTGGAGA GCGTGGCCGC CGAACGCGCC TGCAAACATG CCACCGACGC CCAGATCGAC GAGATCCAGG CCCTGCATGA CGAGATGGTA GGCGCCTGGA AGGCTGGGGC GCTTATGCGC TATTTCCACA TCAACCAGAC CATCCATCAG AAGATTGTCG ACTGCGCAGC CAATCCGACG CTTTCAAGGC TCTACATGGC TGAAAGCCAG CGGATCCGCC GGTTCCGCTA TGCGGGCAAT CAGATCAGCG ACCGCTGGGC GCGCGCGGTC TACGAGCACG AGCAAATCCT CGATGCCCTG CGCCATCGCC AGGGCGCCTT GCTGCGCGAG GTCCTGCGCA GCCATCACCT CAGTGGCTGG CGTACCACCC GTGCGGTGCT GGAAGGCGAG ATCCGGCTTT AG
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Protein sequence | MDIEKQWPRG QRAAFVANFI RDQIVSGELA ASTRINERVL TEQLGVSRTP LREAFKILES EGLLTIEPNR GAMVTAISPQ EVELAIEVLI ALESVAAERA CKHATDAQID EIQALHDEMV GAWKAGALMR YFHINQTIHQ KIVDCAANPT LSRLYMAESQ RIRRFRYAGN QISDRWARAV YEHEQILDAL RHRQGALLRE VLRSHHLSGW RTTRAVLEGE IRL
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