| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3387 |
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| Symbol | |
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| ID | 4581944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 531715 |
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| End bp | 532722 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639770703 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_917156 |
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| Protein GI | 119386101 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA TCAATCGCCG GCTGTTCGTG CAAGGGGCGG CAGCCGTATC GGCGGCCAGC
ATTCTGGCCA CCCCGCAGAT CCTGCGTGCG CAAGGCAGCG TCAAGCTGCG CTTCGGCCAC
CCGCATCCCG AAACCGACAG CTGGCAGGAT GCCGGCAAGT GGATGGCCGA GCAGCTGGCC
GAGAGGAGCG GCGGCGAGAT CAGCCTCGAC ATTTTCCCGA ACGGCATCCT CGGGAATGAC
TCGACGATGA TCAACTCGGT CCGCGGCGGC ACGCTGGACC TGATGGTCAC GGGAAATCCG
TTCTTCACCG GGCTTGCGCC GCAGCTGAAT GTTCTTGACC TGCCTTACCT GTTCCACAGC
CGCGAACATG TTGGGGCCGT TCTGGACGGC GAGTTGGGCG ACGAACTGCG CATGGGCCTG
GCCGGTTCGG GCTTGAAGGC GCTGTCCACC TGGGAAACCG GATGGCGCCA CATCACCAAC
AGCCGCCGCC CCGTGCACAC GCCCGACGAC GTGAAGGGTC TGAAGATCCG TACCACGCCG
AACCCGGCGC ATATCATGGC GTTCGAGCTG CTTGGCGCCG TGCCGACGCC GATGGCCTTC
ACCGAGCTGT TCACGGCGCT CGAAATGCGT TCGATCGACG GGCAGGAAAA TCCGACTACC
CTGATCCTGA ATTCAAACTT CTACGAGATC CAGAAATACA TCTCGCTGAC CGGCCATGCC
TTCACCTCGT CGCCGCTGGT GATGAACGAG ACCAAGTTCA ACGGCTTGGG TGCGGATCAG
CAGACCCTCC TGGTTTCCGT GGCGGCCGAG GCGGCCAAGC TGCAGCGCCA GATGAACACC
GAACGCGAAG GCACCGCGCT GGCCGCGCTG AAGGAAAATG GCATGGAAGC GGTCGAGGAT
ATCGATCAGG CCGCGTTCCG CGCCATCGTC GAAGCGCCGA TCAAGGAAGA TTTCTCGGCC
AAGTTCGGGC CCGAGCTGAT CGACCGGATC ACCGCTCTGG CCAGCTGA
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| Protein sequence | MIKINRRLFV QGAAAVSAAS ILATPQILRA QGSVKLRFGH PHPETDSWQD AGKWMAEQLA
ERSGGEISLD IFPNGILGND STMINSVRGG TLDLMVTGNP FFTGLAPQLN VLDLPYLFHS
REHVGAVLDG ELGDELRMGL AGSGLKALST WETGWRHITN SRRPVHTPDD VKGLKIRTTP
NPAHIMAFEL LGAVPTPMAF TELFTALEMR SIDGQENPTT LILNSNFYEI QKYISLTGHA
FTSSPLVMNE TKFNGLGADQ QTLLVSVAAE AAKLQRQMNT EREGTALAAL KENGMEAVED
IDQAAFRAIV EAPIKEDFSA KFGPELIDRI TALAS
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