| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3377 |
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| Symbol | |
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| ID | 4581934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 523854 |
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| End bp | 525593 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639770693 |
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| Product | hypothetical protein |
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| Protein accession | YP_917146 |
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| Protein GI | 119386091 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.115578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.258124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG AGGACGATTT CCGCATTCGC TCGGGGCGCA TCCGCTCCAG CCGCAGCCAG
CGTGCCCGGC CTTTCGTGGC CCAGGCGCTG GCCGCCGCCC AGAAGGCCGG CGGGCGCGTC
TCGCGCAGCG GCAGGATCGT GTCGCCGGGT GCCTCGCGCT TCGGCCGGGG CCGAACTGCT
GCCGTCCGCG CCAACAGGCT GATCACCCGC CGCACCCGGC TCTGCACCGT CAAGGTCCGG
GTGGTGCGCA GAATCGGGCA GGCCGCCGCG CTGCCCCGGC ATCTGGGCTA TCTCGGCCGC
GACGGCGTCG CCCGCGACGG AGAAAAGGCC CACATGTTCG ATCCGAGCAG CGACGATGCG
GACATCAGGG AATTCGCCGA GCGCAGCGAG GACGACCGCC ATCATTTCCG CTTCATCGTC
TCGCCCGAGG ATGCCGCCGA CATGGCGGAC CTGAAACAGT TCGCCCGGGA CCTCATGGCG
CAGGCGGAAA AGGATCTCGG CACCGAACTG GACTGGATCG CCGTCGATCA CTGGAACACT
GACAATCCCC ATGTCCATGT CATCCTGCGG GGGCGGGCGG ATGACGGCAA GGACCTGGTC
ATCTCCCGCG ACTACATCCG GGAAGGCTTG CGCGACCGGG CGCAGGACCT GATCACCCGG
GAACTGGGGC CGCGCCATGA CCACGAGATC CGCCGCAGCC TGATGCGGCA GGTCGAGGCG
GAACGCTGGA CCGCGCTCGA CCGCCAGCTG GTCCGCGACG CCGGCAAGTC CGGCGTCATC
GACATGGCGC CGGGCATCGA CGGTCCGCGC GACGATTTCC TGCCGCAGAA GGTCGGCCGG
CTGCGGCATC TGGAACGCCT CGGCCTGGCC GATCGGGTCG GGCAGGCGCA ATGGGTGATC
CGGCGCGAGG CCGAGACCGT GCTGCGCGAT CTCGGCGAGC GCGGCGACAT CATCAAGCGC
ATCCATCGGG CGCTGTCGGG GCAGGGGATC GATCGCGGGG TTTCGGACTA CGTCTTCGCC
AGCGAGAAGG CCGATGGTCC GATCCTCGGC CGGCTGGTCG AGCGCGGCCA TGACGACGAG
TTGAAGGGGA CCGCCTATGC GGTGATCGAC GGTGTCGATG GCCGCACCCA TCATATCCGG
CTGCCGCATT TCGACGCCGC GGGCGACAGC GCGCCCGGCT CCATCGTCGA GCTGCGGTCC
TACGAGGATG CGAAGGGCGT GCGCCGCACC GCCCTGGCTG TCCGCTCCGA TCTGGATATC
CGCGCCCAGG TGACCGCGAG CGGCGCCACA TGGCTTGATC GCCAGGCGGT CTCTCGCGAT
CCCGCGGTGC TGTCGGAGGC CGGTTTCGGC GCCGAGGTGC GCCAGACGAT GCAGCGGCGC
ACGGAACATC TGATCGGGGA GGGTCTGGCC GAACGGCAGG GCAGCCGCAT CGTCTTCGCC
CGCCGGCTGC TCGACCGGCT GCGCGAGCGT GAGATCGGCG CGCTGGCCGA GAAGCTTGCC
GCCGAGACCG GCCTGTCGTT CGAGCGCGCG GCCAGGGGCG ACACCATTGC GGGCACCTAT
CGCCGGCGCT TCGCCCTGGC CTCGGGTCGC TTCGCCATGA TCGACGACGG GCTGGGTTTC
AAGCTGGTGC CCTGGACGCC CTCGCTCGAA CGCCATCTGG GCCAACACGT CTCCGGGGTC
GTGCGCGGCG ATGGCGGCGT GGATTGGAGC TTCGGCCGCA AGCGCGGGCT GGGGTTGTAG
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| Protein sequence | MSNEDDFRIR SGRIRSSRSQ RARPFVAQAL AAAQKAGGRV SRSGRIVSPG ASRFGRGRTA
AVRANRLITR RTRLCTVKVR VVRRIGQAAA LPRHLGYLGR DGVARDGEKA HMFDPSSDDA
DIREFAERSE DDRHHFRFIV SPEDAADMAD LKQFARDLMA QAEKDLGTEL DWIAVDHWNT
DNPHVHVILR GRADDGKDLV ISRDYIREGL RDRAQDLITR ELGPRHDHEI RRSLMRQVEA
ERWTALDRQL VRDAGKSGVI DMAPGIDGPR DDFLPQKVGR LRHLERLGLA DRVGQAQWVI
RREAETVLRD LGERGDIIKR IHRALSGQGI DRGVSDYVFA SEKADGPILG RLVERGHDDE
LKGTAYAVID GVDGRTHHIR LPHFDAAGDS APGSIVELRS YEDAKGVRRT ALAVRSDLDI
RAQVTASGAT WLDRQAVSRD PAVLSEAGFG AEVRQTMQRR TEHLIGEGLA ERQGSRIVFA
RRLLDRLRER EIGALAEKLA AETGLSFERA ARGDTIAGTY RRRFALASGR FAMIDDGLGF
KLVPWTPSLE RHLGQHVSGV VRGDGGVDWS FGRKRGLGL
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