Gene Pden_3361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3361 
Symbol 
ID4581918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp513986 
End bp514396 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content66% 
IMG OID639770677 
Productsingle-strand binding protein 
Protein accessionYP_917130 
Protein GI119386075 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.437989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.222471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACA TCGTCATCCT CGCCGGCACC ATCCGCCAGG CCCCCGAAAC CCGCACCACC 
CGCACCGGCA CCGACGTCAC CCGCTTCAAG CTGGTCACCT CGCGCCCGCG CTATTCGGAA
GGCCGGGTCG TGCGCGACGA GAAGGGCTAT CGGGTCGAGG ACGCGGAATG GCACCGCATC
GTCGCCTTCA ACGGCCTGGG CCGGACCATC CAGCAATATT GCGACACCGG CACGAAGGTG
CTGGTGCGCG GCCGCATCCA CTACACGAAA TGGCAGGATG CGGAAGGCCA GGACCGCTAC
GGCTGCGAGA TCGTCGCCGA GACGGTGGAT TTCCTGAGCC GGGCGCCGCA GTCCGAGACC
GACGACGAGG ACGAAGGCCG GTTCATCGAC GAAGACGACA TCCCGACCTG A
 
Protein sequence
MQNIVILAGT IRQAPETRTT RTGTDVTRFK LVTSRPRYSE GRVVRDEKGY RVEDAEWHRI 
VAFNGLGRTI QQYCDTGTKV LVRGRIHYTK WQDAEGQDRY GCEIVAETVD FLSRAPQSET
DDEDEGRFID EDDIPT