Gene Pden_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3357 
Symbol 
ID4581914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp511449 
End bp512126 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID639770673 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_917126 
Protein GI119386071 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.363885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC AGGAAAATAC CCCCCGCAAC CTCGTCATCA ACGGCGATTG CATCGAGGTG 
ATGCAGGCGT TCGGCACCGG ATCGGTGGAT TTCATCCTGA CCGATCCGCC CTATGTGACC
CGCTTCCGCG ACCGGCAGGG CCGCACCGTG GCCAATGACG ACAACGCCCG CTGGCTGCGC
CCGGCCTTCG CCCAGATGCA CCGGGTCCTG AAGCAGGGCG GTTTCTGCGT CAGCTTCTAC
GGCTGGAACA AGGTGGATCT GTTCGTGGAG GCCTGGAAGG CGGCGGGCTT CCGCATCGTC
GGGCATCTGG TGTTTCGCAA GCGTTACGCC TCCTCGGCGC GGTTCCTGCG CTACGAGCAC
GAACAGGCCT ATCTGCTGGC GAAGGGCGAT CCGGTTCTGC CCGCCCGTCC GGTGCCCGAT
GTGCTGGATT TTCCCTATAC CGGCAACAAG CTGCATCCGA CGCAGAAGCC GGTGGCGGCG
CTGCGCAGGC TGATCGGGGC GTTTACCCAG CCCGGCGATC TGGTGCTGGA CCCGCTCAGC
GGCAGCGGCT CGACCTTGGC GGCGGCGCAT CTGCTGGGCC GCGACTGGCT TGGGGTGGAA
CTGGACGTGG CGCATTACCA GACCGCCGGC AAGCGGATGG CGGCCCTGCA ACAGCGAGAC
CGGAAGGCAG CGGCATAG
 
Protein sequence
MTAQENTPRN LVINGDCIEV MQAFGTGSVD FILTDPPYVT RFRDRQGRTV ANDDNARWLR 
PAFAQMHRVL KQGGFCVSFY GWNKVDLFVE AWKAAGFRIV GHLVFRKRYA SSARFLRYEH
EQAYLLAKGD PVLPARPVPD VLDFPYTGNK LHPTQKPVAA LRRLIGAFTQ PGDLVLDPLS
GSGSTLAAAH LLGRDWLGVE LDVAHYQTAG KRMAALQQRD RKAAA