Gene Pden_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3324 
Symbol 
ID4581883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp484910 
End bp485728 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content57% 
IMG OID639770643 
Producttype III restriction enzyme, res subunit 
Protein accessionYP_917096 
Protein GI119386041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGAT ATCTCGCCAC TCTGTTGGCT GCGTTGATTT TCCCCGCGGC AGCGGCGGCC 
CAATCTGAGA TCGCATTGGC GGGCCACCTG ATCGCGTTCG ACACTATCGA CTACGATAGT
CATGCGGACC TGCTGTACAA GCTCGCCGGT CAGGTGGTTG GGCATCTGCG CAGCTACCTG
AGTACGGAAG ATGACGTTGA GAACGTGGCG TTGAATCACG GCAAGGAATG GGCTGATTTC
ATCTTCCAGC AGATGAAGGA CCACTACTGG GAGATGCCTA CGGACTATCG GGCGAAGGTG
ACCAGAGGCT TCCGCGTCCT CAATGCGCAG AACTTCAATG TTTCGGGGGT GGACCGAATT
CGCGACCTGA AAAACGGTGT GACGCCCCGG TCCGACACAA GGAAATATGT ATTCAACGGT
TTGCAGAAAT GCGGATACCC ATACCAGAAA TTCGATTCCG ATGACGAACG CCGGTTCGCC
GTTCTGATCG ACGGAGACTT TGAGAAGTCT GTCCGCCGTT GGATCAAGCC GGGCGCCCGG
CAGTTCCAGA TCGAGTATGC GTCCGGTCAA GCCTACGAGC CGGATTTCGT GGTTGAGACG
GATACGGAAA AGCTGATCGT CGAGATCAAG GCGCGGAACG AAATGACCGA CGAGATTGTC
CTGGCAAAGG CCCGCGCCGC TGCCGAATGG GTGAAATACG CCAATGAACA TGCCGAGGCC
AACGGTGGAA AGTCGTGGGG TTATCTTCTG GTTCCCGGTG ACTCGATCAC CGAAAGCGCC
ACGTTGGCGG GCCTGGTCGC GTCACACCGG CGGGAATAG
 
Protein sequence
MKRYLATLLA ALIFPAAAAA QSEIALAGHL IAFDTIDYDS HADLLYKLAG QVVGHLRSYL 
STEDDVENVA LNHGKEWADF IFQQMKDHYW EMPTDYRAKV TRGFRVLNAQ NFNVSGVDRI
RDLKNGVTPR SDTRKYVFNG LQKCGYPYQK FDSDDERRFA VLIDGDFEKS VRRWIKPGAR
QFQIEYASGQ AYEPDFVVET DTEKLIVEIK ARNEMTDEIV LAKARAAAEW VKYANEHAEA
NGGKSWGYLL VPGDSITESA TLAGLVASHR RE