| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3301 |
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| Symbol | |
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| ID | 4581862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 466414 |
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| End bp | 467559 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639770622 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_917075 |
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| Protein GI | 119386020 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.446472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGCA TCTGGCTATC GGGTCTTCTT CTGGCGGCGG CTGTCGCTGC CGGCTTTCTG
TTCTTCACCG AACGCCCCCT GACGGTGGCG ATCGTTCAGC CCGAACATGA TGTGGCCCTT
CGCATCTACG GGCTCGGCAC TGTCGAGGCG CGAATACTCA GCCGCGTCGG CTTCGAGGTG
GGCGCCGCCC TGACCCGGCT TTCCGCCGAT GCCGGGGACA GTGTGGCCAA GGGGCAGGAA
CTGGCCATCC TTCACTCTGC CGAACAGGAA GCGCGCGTTG CCCGCGCCGG CGCAGCGGTG
ACAGCCAACG AGGCCAATCT TGCCAAGGCC GATGCCGCGG TCGTGCGCGC CCGCGCCGTC
CTGGCGCAGC GCGAGGCGGC GAACCGCCGC CAGCAGGGAC TGGCGCTGCG CGATGTCGCC
TCGGTCCAGC GCGCCGAGGA GGCGCAGCGC GACGAGGATG TGGCCCGCGC CGATCTGGCC
GTGGCCGAGG CGGATGTGGC GGTGATCCGG GCACAGGGTC TTGATGCGGC GGCGGCGCTG
CGGCAGGAGG AAGCCCTTCT CGCCCATCAC CGGCTGGTCG CGCCCTATGA CGCGCTGATC
GTCGCCCGCC ATGCCGAGCC GGGCACGGTG GTGAAGGCCG GCGATGCGAT CTTCACCCTG
ATCGACCCGG CCACCGTCTG GATCCAGGCC TATGTCGACG AAGAACGCGC CGGTCAGCTT
GCCCTTGGCC AACCCGGCAC CATCCGGCTG CGCTCGCAGC CCGCGGCCGA GTTTCACGGC
ACCATTGCCC GCATCGGCAT CGAAAGCGAC CGGGTGAACG AGGAACGCCG CGTCTGGTTG
ACCTGCGCCG ACTGCCCCGC CGAGATGTTT CTTGGCGAAC AGGCCGAAGT ACGCATCCTG
ACCGGCACCC GCGCGAGCGC ACTGATGGTG CCCGAGGTCG CCATCACCGG CTTCGACGGC
CATCGCGGCA CGGTCTGGAC GGTGCAGGAT AGCCGCCTTG CGCGGGTGGG GCTGACCTTC
GGCGCCCGCG ATGATCGCGG CCGCGTCGAG GTCACGGGCG GCCTGCCCGA AGGAGCCGCC
ATCGTCACCA GCCCGCCGAA GGGCGCCGCA GAGGGCCGGC GCGCCCGCGT CGGCGAGGCG
CCATGA
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| Protein sequence | MRRIWLSGLL LAAAVAAGFL FFTERPLTVA IVQPEHDVAL RIYGLGTVEA RILSRVGFEV
GAALTRLSAD AGDSVAKGQE LAILHSAEQE ARVARAGAAV TANEANLAKA DAAVVRARAV
LAQREAANRR QQGLALRDVA SVQRAEEAQR DEDVARADLA VAEADVAVIR AQGLDAAAAL
RQEEALLAHH RLVAPYDALI VARHAEPGTV VKAGDAIFTL IDPATVWIQA YVDEERAGQL
ALGQPGTIRL RSQPAAEFHG TIARIGIESD RVNEERRVWL TCADCPAEMF LGEQAEVRIL
TGTRASALMV PEVAITGFDG HRGTVWTVQD SRLARVGLTF GARDDRGRVE VTGGLPEGAA
IVTSPPKGAA EGRRARVGEA P
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