Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3296 |
Symbol | |
ID | 4581857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 461511 |
End bp | 462173 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639770617 |
Product | hypothetical protein |
Protein accession | YP_917070 |
Protein GI | 119386015 |
COG category | [S] Function unknown |
COG ID | [COG3803] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00695887 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.279005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGATG ACATGACCGA TAGCAATGAT GCCAGACAGA TCGGTGAGGT TCTGGATTTC TGGTTCCCCG AGGGCCGCGC GCTGGATATC GACCCGGACC GCCATGCCGA ACTGTGGCGC TGGCGGATGC ATGGCGGTGC GGATGGGGCG ATTGCGGCCC GCTTTGGCCC GTTGACCGAA CGTGGCGCGG CGGGTGGGCT GGACCACTGG TCCGCCACGC CCGAGGGCCG GCTGGCTCTG ATCGTGGTGC TGGACCAGTT TCCGCGCTCG CTGTGGCGGG GCAGCGCGCG GGCCTGGGCG CAAGACACGG AGGCGCTGGC GCAGGCCGAG GCCGGGCTGG ACAATGGCGA CTGGACAGCG CTTGGCCTGT CCTGGTTCCA GATTACCTTC ACGCAGCCGC TGGGCCATGC CGAAGGGCCG GAGCATCTGG CCCGCATCGA CCGGCTGATC GCCCTGCGCC GCGACATCGC CACCCGCGCG CCGGCGCCGT TGCGGCCGCT CTATGCCTCG CTCGTCGATC AAGCGGGGCA GGTGCGCCGC ATCATCGCCA GCTTTGGCCG CCACCCGCAC CGCAACGCCA TCCTTGGCCG CAGATCGACG CCCGAGGAGG AGGCCTATCT GGAAAAGGGC GCGTTTCCGC ATCAGCGCGT CTTTCGGGGA TGA
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Protein sequence | MGDDMTDSND ARQIGEVLDF WFPEGRALDI DPDRHAELWR WRMHGGADGA IAARFGPLTE RGAAGGLDHW SATPEGRLAL IVVLDQFPRS LWRGSARAWA QDTEALAQAE AGLDNGDWTA LGLSWFQITF TQPLGHAEGP EHLARIDRLI ALRRDIATRA PAPLRPLYAS LVDQAGQVRR IIASFGRHPH RNAILGRRST PEEEAYLEKG AFPHQRVFRG
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