Gene Pden_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3296 
Symbol 
ID4581857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp461511 
End bp462173 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID639770617 
Producthypothetical protein 
Protein accessionYP_917070 
Protein GI119386015 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00695887 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.279005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGATG ACATGACCGA TAGCAATGAT GCCAGACAGA TCGGTGAGGT TCTGGATTTC 
TGGTTCCCCG AGGGCCGCGC GCTGGATATC GACCCGGACC GCCATGCCGA ACTGTGGCGC
TGGCGGATGC ATGGCGGTGC GGATGGGGCG ATTGCGGCCC GCTTTGGCCC GTTGACCGAA
CGTGGCGCGG CGGGTGGGCT GGACCACTGG TCCGCCACGC CCGAGGGCCG GCTGGCTCTG
ATCGTGGTGC TGGACCAGTT TCCGCGCTCG CTGTGGCGGG GCAGCGCGCG GGCCTGGGCG
CAAGACACGG AGGCGCTGGC GCAGGCCGAG GCCGGGCTGG ACAATGGCGA CTGGACAGCG
CTTGGCCTGT CCTGGTTCCA GATTACCTTC ACGCAGCCGC TGGGCCATGC CGAAGGGCCG
GAGCATCTGG CCCGCATCGA CCGGCTGATC GCCCTGCGCC GCGACATCGC CACCCGCGCG
CCGGCGCCGT TGCGGCCGCT CTATGCCTCG CTCGTCGATC AAGCGGGGCA GGTGCGCCGC
ATCATCGCCA GCTTTGGCCG CCACCCGCAC CGCAACGCCA TCCTTGGCCG CAGATCGACG
CCCGAGGAGG AGGCCTATCT GGAAAAGGGC GCGTTTCCGC ATCAGCGCGT CTTTCGGGGA
TGA
 
Protein sequence
MGDDMTDSND ARQIGEVLDF WFPEGRALDI DPDRHAELWR WRMHGGADGA IAARFGPLTE 
RGAAGGLDHW SATPEGRLAL IVVLDQFPRS LWRGSARAWA QDTEALAQAE AGLDNGDWTA
LGLSWFQITF TQPLGHAEGP EHLARIDRLI ALRRDIATRA PAPLRPLYAS LVDQAGQVRR
IIASFGRHPH RNAILGRRST PEEEAYLEKG AFPHQRVFRG