Gene Pden_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3270 
Symbol 
ID4581831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp435394 
End bp436701 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content66% 
IMG OID639770591 
Productmajor facilitator transporter 
Protein accessionYP_917044 
Protein GI119385989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000349224 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGCCCA GCCCCAATAC GGGCAAAATT CCCCAAGAGA ACCCCATAAC TTTCCCGCTC 
TGCGACACGG TGATGAACAG GACAGGCCAG ATCCCCACCT CGTTGCGCGT CCTGACCGGC
ACGCAGTTCG GCTCCTTCTG TCTTGGCAAC GGACTTTCGC TGGTCGGAAC CTGGATGCAG
CGCATCGCCT GCGGCTGGCT GATCTGGGAA TGGACACAGT CGGCCTTCTG GCTGGGCGTG
CTTGCGGCGG GAGACCTGCT TCCGGTCATG CTGATCGGGC CATTCGCCGG TGTCGCGGCC
GATCGCTGGG ACAGGCTGCG CCAGAACATC CGGGCCCAGG CTGTCTCGGC GCTGCTGGCG
CTGCTGATGG CGCTGCTTCT TGCGATCGGC CGTTTGGGAC TGCTCGAGGT GATCGCCCTG
ACGACTCTGC AAGGCACGCT CTCCGCAGCG ATCCAGCCCG CGCGACTGGC GATGGTCAGG
CAGATGGTCG GGCGCGCGGA CCTTGGTGCG GCGGTCGCGC TGAATTCCGT CACCGTGAAC
CTGGCCCGCC TGATCGGGCC CGCCCTCGCC GGAATGATGA TCGTGCGGCT GGACATCATC
TGGGTCTTCG CTGTCAACGC TGCCGTGACG GCGCTTTATG TCCTCATCCT CGGCCGGCTG
TCGCTGGCCT TTCCGCAAAA GCTCTCGGCG CCGCAGCCGT TCCTGCGCGA AATGGCCGAG
GGCTTCCGTC ATGTCGTCGC CACCCCGGCG CTGTGGCTGA TCCTGCTGGT CATGCTGCTC
GGCGGGATGA TCGTGCGATC CATGCTCGAA CTCATGCCGG CGATTGCGGT CCGCATCTAT
CCCGGAAACG CGATGGGGCT TGCGCTGCTC ACCGGGTCGG CGGCCTGCGG CGCCATCGTC
TCGGGCCTGA CGATCCGGCC GCGATCGGCG GTGCGGCTTC TCTATGACGT TATGGTCCTG
TGGGGATTGG GCGCTGGGGC AGCGATCCTC ATGACTTGGG CGACCATCCC GGGACTCGCC
GTGGCCGCCG CCGCCCTTCT GGGCGCCGCG ACAACCCGGG GGCTGATCTC GACCCAAACC
TTCGTGCAGA TCACGACGCC CCCCGATCTG CATGGTCGCA TCCTCAGCCT GCACGGGCTG
ATCGCCAGGG GAAGTCCGGC ACTCGGCGCG CTCGTCATCG GCTTTTTCGC CGACCGGATC
GGCATTGCCG CCGCGACGCT GATCGCGGCG GCAATGCTGA CCTTCTGCTT CCTTCTGCTT
GCCCCCCTGA TCCGAGGCGC CGCAAGCACG GTCGAGGAAA CCGACTGA
 
Protein sequence
MVPSPNTGKI PQENPITFPL CDTVMNRTGQ IPTSLRVLTG TQFGSFCLGN GLSLVGTWMQ 
RIACGWLIWE WTQSAFWLGV LAAGDLLPVM LIGPFAGVAA DRWDRLRQNI RAQAVSALLA
LLMALLLAIG RLGLLEVIAL TTLQGTLSAA IQPARLAMVR QMVGRADLGA AVALNSVTVN
LARLIGPALA GMMIVRLDII WVFAVNAAVT ALYVLILGRL SLAFPQKLSA PQPFLREMAE
GFRHVVATPA LWLILLVMLL GGMIVRSMLE LMPAIAVRIY PGNAMGLALL TGSAACGAIV
SGLTIRPRSA VRLLYDVMVL WGLGAGAAIL MTWATIPGLA VAAAALLGAA TTRGLISTQT
FVQITTPPDL HGRILSLHGL IARGSPALGA LVIGFFADRI GIAAATLIAA AMLTFCFLLL
APLIRGAAST VEETD