| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3237 |
|---|
| Symbol | |
|---|
| ID | 4581801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 403185 |
|---|
| End bp | 404078 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639770561 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_917014 |
|---|
| Protein GI | 119385959 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACG AAAACTTCAA CGCGCTCGCC ACCTTTGCCA CCGTCGCGCG CGAGCGCAGC
TTCACCAAAG CGGCCGCGAA GCTGGGGATT TCCCAGTCGG CGCTGAGCCA GTCGATCCGC
AATCTGGAGG AAAGGCTGGG CATCCGCTTG CTGACCCGGA CCACGCGCAG CGTGTCGCCA
ACCGAGGCCG GTGAACGGCT GCTCACGACG ATCTCACCGA AGTTTGACGA GATCGAAACC
GCGCTGGCCG ATCTCAGCGC CATGCGTGAC AAGCCCGCGG GCACGATCCG TATCACCACG
GGCGAACATC CGGCGGTCTC GATCCTGCAA CCGGCGCTGG CGACGTTCCT GCCGGAGTAT
CCCGACATCA AGGTCGAGCT GATCGTCGAC TACGGACTGA CTGACATCGT GGCCCAAGGC
TATGACGCCG GCGTCCGCCT CGGCGAGCAA CTGGCCAAGG ATATGGTTGC GGTCAGGATC
GGGCCAGAGA TGCGCATGGC GGTGGTGGCT TCGCCCACCT ATTTCGAGCA TCGCCCGATC
CCGCAAACGG CCGAGGATCT GATCGCCCAC AACTGCATCA GCTCCCGCCT TCCGACCTAT
GGCGGCATCT TCCAATGGGG GCTGGAAAAG GACGGGCATG AGGTGAAGGT GCGCAGCGAA
GGGCAGTTGG TGCTGAACAC CCTTGGCTTA CGGGTCGCCT GCGCGCTGGA TGGCCTGGGC
ATCGCGTATC TGCCCGAGGA TCAGGCTCTG CCTTACATCG CGGAAGGCCG CCTGATCCGC
GTGCTGGAGG ACTGGTGCCC GCGATTTCCA GGCTATCACC TCTATTATCC CAGCCGGAAA
CACCCGTCCC CTGCGTTTGC GCTGCTGCTG GACCGGCTGC GGTATCGGGA ATAG
|
|---|
| Protein sequence | MSNENFNALA TFATVARERS FTKAAAKLGI SQSALSQSIR NLEERLGIRL LTRTTRSVSP
TEAGERLLTT ISPKFDEIET ALADLSAMRD KPAGTIRITT GEHPAVSILQ PALATFLPEY
PDIKVELIVD YGLTDIVAQG YDAGVRLGEQ LAKDMVAVRI GPEMRMAVVA SPTYFEHRPI
PQTAEDLIAH NCISSRLPTY GGIFQWGLEK DGHEVKVRSE GQLVLNTLGL RVACALDGLG
IAYLPEDQAL PYIAEGRLIR VLEDWCPRFP GYHLYYPSRK HPSPAFALLL DRLRYRE
|
|---|
| |