| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3226 |
|---|
| Symbol | |
|---|
| ID | 4581790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 390556 |
|---|
| End bp | 391677 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639770550 |
|---|
| Product | acetyl-CoA acetyltransferases |
|---|
| Protein accession | YP_917003 |
|---|
| Protein GI | 119385948 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGCG CCTATATCGT CGACTACATT CGCACTCCGT TCACGCCGGC CCGCAAAGGC
GCCCTGGCAG CAACGCGCCC GGACGAACTG GCAGGTGGTC TGCTTTCCAC GATGGTGGAG
CGCAGCGGTT TTCCCGCCGA AGAGATCGAG GACATCATCC TTGGCTGTGC GTTCCCCGAG
GGTGAACAAG GACTGAATAT CGCCCGTTGC GCCGCACTGC ATGCCGGATT GCCGCAGACA
ATTGCTGGTT CCACCGTCAA CCGCTGGTGT GGTTCGTCCA TGCAAGCCAT ACAAATGGCC
GCTGGCGCCA TCGCCATGGG TGCGGGCGAT GCCTTTCTGG CCGGCGGCGT GGAATCCATG
ACCCGCGTGC CGATGATGGG GTTCAATCCC CTGCCAAATC CTGCGTGGCC CTCCGATCGC
CGGATGTCGC TTTTGAACAT GGGCCTGACG GCGGAAATCC TGGCAGACCG ATACGGGATC
ACGCGGGCCG AACAGGACGA TTATGCGGCA AAGAGCCAGT CCAAAGCCCT CGCCGCCCAG
TCCGAAGGCC GCCTGTCGGA CGAAATCGCC AGCTCCGCCG ATACCGACAA GGACGGCTGC
CCACGCCAGA CCAGCGTCGA GAAGCTTGCC GGTTTGCAGC CCGTGTTCCG GGCCGACGGA
TCGGTAACCG CCGGCAATTC CTCGCCCCTG ACCGATGGCG CCTCGCTAAC GCTGATATGC
TCGGAAAACT TCGTCAAACG GCATAGCCTT GTCCCGCTGG CCCGCATCGT CGGCTACGCC
GTCTCTGGCT GCGCGCCCGA AATAATGGGA ATCGGACCAG TCGAGGCCAC GCGCAAGGCA
TTGGCCAGAT CCGCCATTTC GGCTGCCGAT CTCGATGTGA TCGAGATGAA CGAAGCCTTC
GCTGCCCAGG TGCTGGCCTG CTGCCGCGAG CTGGATATCG ATCCCGCCAG ACTCAATCCA
GATGGCGGCG CGATTGCGCT CGGCCATCCT CTGGGCGCGA CCGGCGCGCG TCTGGCAGGC
AAGGCGGCAC GTCTACTGGT GCGGGGTGGC GGTCGTTACG GCCTTGCGAC GCAATGCATC
GGTGGCGGCC AAGGTATAGC CATGGTGCTG GAGGCCGCAT GA
|
|---|
| Protein sequence | MQGAYIVDYI RTPFTPARKG ALAATRPDEL AGGLLSTMVE RSGFPAEEIE DIILGCAFPE
GEQGLNIARC AALHAGLPQT IAGSTVNRWC GSSMQAIQMA AGAIAMGAGD AFLAGGVESM
TRVPMMGFNP LPNPAWPSDR RMSLLNMGLT AEILADRYGI TRAEQDDYAA KSQSKALAAQ
SEGRLSDEIA SSADTDKDGC PRQTSVEKLA GLQPVFRADG SVTAGNSSPL TDGASLTLIC
SENFVKRHSL VPLARIVGYA VSGCAPEIMG IGPVEATRKA LARSAISAAD LDVIEMNEAF
AAQVLACCRE LDIDPARLNP DGGAIALGHP LGATGARLAG KAARLLVRGG GRYGLATQCI
GGGQGIAMVL EAA
|
|---|
| |