Gene Pden_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3222 
Symbol 
ID4581786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp384445 
End bp385959 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content62% 
IMG OID639770546 
Producthypothetical protein 
Protein accessionYP_916999 
Protein GI119385944 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG ACCTGATCTC CAGCATCTCG ATCGGATTGG CGACAGCGCT CACCTGGTCG 
AACCTTGGCT TCTGCCTGGG CGGCGTCCTT CTGGGCATGT TTGTGGGTGT GCTGCCCGGC
ATCGGCGCGA TGACCGCGAT CTCGATGCTG ATGCCACTGG TCTATCACCT CGACCCGACT
TCCGCCCTGA TCATGTTGGG CGGGATCTGG TACGGCACGG CTTATGGCGG CAGCATCGCC
TCGATCCTGC TGAACCTGCC CGGCACGCCC TCCACCGCCG TGACCTGCCT GGACGGCTAT
CCCATGGCGC GGCAGGGACG CGCCGGGATC GCGCTGTTCA TGACCACAGT CGCCTCCTTC
TTCGGCGCAA GCGTGGGCAT CGTCCTGATG ATGCTGTTCT CGCCCGTCAT CGTGAACGTC
GCCTTCAACT TCACCTCGGC CGAATATTTC TCGCTGATGG TTCTGGGGCT GATCGCCGCA
TCCACCATAT CGGCGGAATC GCCGGTCAAG GGGCTTGCCA TGGTGGGGAT CGGCATCCTG
CTGGGCTTGG TCGGCATGGA CCTTTATGCC AGCGTGCCGC GCTTTACCCT TGGCTTTTAC
GAATTGCTGG AAGGGATCAG TCTGGTCGCG CTGGCTCTGG GCATCTTCGG GGTCGCCGAG
ATCATCGCCA GCGCGCGCAT CGATCAAAGC GGAACGCTGA TGAGCAAGGT CACCTTCAGG
TCGATGATCC CGACCCAGGA CGACCGGCGC CGTTCACTCA TGCCGATGGT GCGCGGTTCA
GGGGTCGGGG CCTTCTTCGG CATCCTTCCC GGCATCGGAC CGTCGATCGC ATCCTTCCTG
GCCTATGCCT GGGAGCGCAA GGTCGCTGAC GAACCGCAAC GCTTCGGCCA TGGTGCCATC
GAAGGCATCA TTGCGCCCGA AGCGGCGAAC AACGCCGCCG ACCAGGCCGC GTTCATCCCG
ACGATGACGC TGGGCATTCC CGGCAGCCCG ACCATGGCAC TGATCATCGG CGTCCTGATC
ATCCACGGCA TCACGCCCGG ACCGACGCTG GTGACCGAGC GACCGGACCT GTTCTGGGGA
CTCATCATGA GCTTCTGGAT CGGGAACATT CTGCTTTTGA TCATCAATAT CCCGCTGATC
GGCATCTGGG TGCGGCTCCT GCAGGTGCCC TATGGCTACC TCTATCCGGC GGTGGTGATG
TTCATGTGCA TCGGTGCCTT CACGATCCAC AACAACCCTT TCGACGTGTT CTCGATCATG
GTGTTCGGAC TGGTGGGCTA TGGGATGCGG GTGCTGGCCT TTCCGGTCGC ACCGCTGATC
CTGGGTTTTG TGCTTGGCCC CCTGATGGAG GAGCATTTCC GCAGGGCCAT GACGATCTCG
TTCGGCGATC CGATGGTGTT TCTGCAACGA CCGGTCTCGG CCGGAATTCT GGCCATCACG
GCCCTGTTCC TGCTGTTCTC ACTGGTATCC TTCATCAGGA CCAAGGCTGC GGGGACTCGG
GCAAGGGGCG GCTGA
 
Protein sequence
MENDLISSIS IGLATALTWS NLGFCLGGVL LGMFVGVLPG IGAMTAISML MPLVYHLDPT 
SALIMLGGIW YGTAYGGSIA SILLNLPGTP STAVTCLDGY PMARQGRAGI ALFMTTVASF
FGASVGIVLM MLFSPVIVNV AFNFTSAEYF SLMVLGLIAA STISAESPVK GLAMVGIGIL
LGLVGMDLYA SVPRFTLGFY ELLEGISLVA LALGIFGVAE IIASARIDQS GTLMSKVTFR
SMIPTQDDRR RSLMPMVRGS GVGAFFGILP GIGPSIASFL AYAWERKVAD EPQRFGHGAI
EGIIAPEAAN NAADQAAFIP TMTLGIPGSP TMALIIGVLI IHGITPGPTL VTERPDLFWG
LIMSFWIGNI LLLIINIPLI GIWVRLLQVP YGYLYPAVVM FMCIGAFTIH NNPFDVFSIM
VFGLVGYGMR VLAFPVAPLI LGFVLGPLME EHFRRAMTIS FGDPMVFLQR PVSAGILAIT
ALFLLFSLVS FIRTKAAGTR ARGG