Gene Pden_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3217 
Symbol 
ID4581781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp380455 
End bp380880 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID639770541 
Productcupin 2 domain-containing protein 
Protein accessionYP_916994 
Protein GI119385939 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.349466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA CAAAAGCAGG CACACAACCG TCGCAACCTG CTCCGGCAGA ATATTTCACC 
GGGACAGTCC GCGTCGATCC GGTCTTTGCC ACCGACGCAC CGGCGCGCGG AAAAGGCGCC
AACGTCACAT TCGAGCCAGG GGCGCGCACT CATTGGCATC GACACCCGTT GGGCCAAACC
TTGATCGTCA TACAGGGCAA GGGTCTCGTG CAAAGCTGGG GCGGCCCGGT CGAGACGGTG
ACCGCTGGCG ATTGTATCTG GTTCGCGCCG GACGAAAAAC ATTGGCACAG TGCGGCTCCT
GACACCGCGA TGTCGCATCT GGCCATCGCC GGGGTCCTGG ACGGCAACAG CGTGGAATGG
CTGGAACCGG TCGGAGATGA CATCTATTTC GCCACGAAGA GAAAACAATA TAAATCATCT
ATATGA
 
Protein sequence
MRITKAGTQP SQPAPAEYFT GTVRVDPVFA TDAPARGKGA NVTFEPGART HWHRHPLGQT 
LIVIQGKGLV QSWGGPVETV TAGDCIWFAP DEKHWHSAAP DTAMSHLAIA GVLDGNSVEW
LEPVGDDIYF ATKRKQYKSS I