Gene Pden_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3215 
Symbol 
ID4581779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp378959 
End bp379333 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content62% 
IMG OID639770539 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_916992 
Protein GI119385937 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAA TCGAAGCCGG CCGACAGGTC CTCAGGGAAT TGATGGGCGA GGCGTTCCTG 
GAAGCGCGCG ACGCCACGCG CAACGATTTC AACGCGGCGG TTCAGGACTA TGCCGACGAT
GTCTGTTTCG GCACGGTCTG GTCGCGCCCC GGGATCGACC GCAAAACCCG GTCGATCCTG
AATATCGCGA TGCTGACCGC GCTCGGCCGT CCCAACCAGT TGCGTTCGCA TATCGAAGGC
GCGATCAACA ACGGCTGCAC CAAGGACGAA TTGCGCGAGA TCCTGCTGCA TACGGCCGTT
TACGCCGGAC TGCCCGCCGC CGTCGATGCG TTCCGGGTGG CCGAGGAAAT CCTGCGCAAG
AAAGAGATGC TCTGA
 
Protein sequence
MDRIEAGRQV LRELMGEAFL EARDATRNDF NAAVQDYADD VCFGTVWSRP GIDRKTRSIL 
NIAMLTALGR PNQLRSHIEG AINNGCTKDE LREILLHTAV YAGLPAAVDA FRVAEEILRK
KEML